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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.145.v2....' > 
  2. Transcript 'Moocci.CG.ELv1_2.S34...' > 
  3. Transcript 'KH2012:KH.S918.4.v1....' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g15223.01.t

Possible name(s)

NCL; RBM23; RBM39

Gene model

Boschl.CG.Botznik2013.chrUn.g15223

Location

chrUn [98,272,166 / 98,274,357]

Sequences

Amino acid sequence

Length: 113

>Boschl.CG.Botznik2013.chrUn.g15223.01.p
MFVKNVPYHATEDDLMGLFENVEEVRLLSDRDTGRSKGMAFVQFNDAAGLDKAMESKDEY
ELEGRQLLVDYTDSRSQRSARGGQGGSGVREWSLRVSSSKREDLHYRHLRCTQ

Nucleotide sequence

Length: 340

>Boschl.CG.Botznik2013.chrUn.g15223.01.t
GATGTTTGTAAAAAACGTTCCCTACCATGCGACCGAGGACGATTTGATGGGGCTCTTTGA
AAATGTTGAAGAAGTCAGACTGCTATCGGACCGGGACACCGGAAGATCCAAAGGGATGGC
TTTTGTTCAATTCAACGATGCCGCCGGTCTCGATAAGGCGATGGAATCGAAAGACGAGTA
CGAACTAGAGGGTCGTCAATTGCTTGTCGATTACACGGACAGTCGCAGCCAGAGATCTGC
CCGAGGTGGTCAAGGTGGATCAGGTGTGCGAGAGTGGAGCTTACGCGTAAGTTCGTCGAA
GCGAGAAGACTTGCATTATCGGCATTTACGATGTACTCAA

InterProScan

SMART
RRM_dom (IPR000504) - T[1-70] 1.3E-16
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-102] 1.4E-22
ProSiteProfiles
RRM_dom (IPR000504) - T[1-74] 17.148
Pfam
RRM_dom (IPR000504) - T[2-67] 4.5E-16
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[2-91] 3.49E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value