- Transcript 'KH2012:KH.C1.980.v1....' >
- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.S811.1.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g15946.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
chrUn [103,196,773 / 103,203,631]
Amino acid sequence
Length: 241
>Boschl.CG.Botznik2013.chrUn.g15946.01.p
QLIYNYPEQLFADAGVMAIEHADFEGIERLALVLGGEICSTFDRPDLVKIGKCKLIEEVM
IGEDKMIKFSGVEKAEACTIILRGATQQILDESERSMHDALCVLSQTVKETKTVFGGGCS
EAIMSQAVEELAARTPGKESMAIESFARALRQIPTIIADNAGYDSAELVSQLRAAHTEGN
KTAGLDMSQGCVGDVAELGITESFQVKRQVLMSASEAAEMILRVDDIIRAAPRQRRPDHP
H
Nucleotide sequence
Length: 727
>Boschl.CG.Botznik2013.chrUn.g15946.01.t
CAACTGATCTACAATTATCCGGAACAGCTGTTCGCCGACGCGGGAGTAATGGCGATCGAA
CACGCTGATTTCGAAGGCATCGAACGCCTGGCTCTGGTGCTCGGCGGCGAGATTTGCTCC
ACGTTCGATCGGCCGGATCTGGTCAAGATCGGAAAATGTAAACTCATAGAAGAAGTGATG
ATCGGCGAAGACAAGATGATCAAGTTTTCAGGCGTGGAAAAGGCGGAAGCTTGCACGATC
ATATTAAGAGGCGCGACGCAGCAAATTTTGGATGAATCCGAACGATCCATGCATGACGCT
CTCTGCGTTTTGTCACAAACCGTTAAAGAAACAAAGACTGTGTTTGGAGGTGGCTGTTCA
GAGGCTATTATGTCTCAAGCCGTGGAAGAACTAGCTGCGCGAACCCCGGGAAAAGAATCG
ATGGCCATCGAGTCATTTGCGAGAGCTCTGAGACAGGTCCCGACCATTATTGCTGACAAT
GCAGGCTACGACAGCGCTGAACTGGTGTCGCAATTGCGGGCGGCCCACACCGAAGGCAAC
AAAACTGCGGGTTTAGGCATGAGCCAGGGTTGTGTCGGAGATGTCGCCGAACTGGGCATC
ACCGAATCGTTTCAAGTCAAACGTCAAGTTCTGATGAGCGCGTCGGAAGCCGCAGAGATG
ATCTTGAGAGTGGATGACATCATCAGGGCTGCTCCCAGGCAAAGACGCCCGGACCACCCG
CACTGAT
| PANTHER |
Chap_CCT_beta (IPR012716) - T[1-236] 1.7E-128 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-236] 1.7E-128 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[1-73] 3.1E-30 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[3-84] 7.06E-21 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[3-231] 4.7E-71 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[74-241] 5.5E-48 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[79-101] 5.5E-5 - T[113-125] 5.5E-5 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[87-231] 5.36E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.102 % | 135 | 1.01E-36 |
| TCPH_HUMAN | 34.222 % | 147 | 2.95E-41 |
| TCPB_HUMAN | 77.406 % | 397 | 5.73E-138 |