Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g17158.01.t

Possible name(s)

JMJD4; JMJD6; JMJD8

Gene model

Boschl.CG.Botznik2013.chrUn.g17158

Location

chrUn [111,102,016 / 111,106,718]

Sequences

Amino acid sequence

Length: 370

>Boschl.CG.Botznik2013.chrUn.g17158.01.p
MESDTHLGQDFRDFGVVALLDWRVGRSQLWKYTVIIMSSHKSRKRIRAAKKDARPELKGH
HGWCGLNYARTFSLRKEEVIDTCPREDVTKMSKEEFIEKYERPLRPVVLLNAQKDWLADY
KWTTDRLVKKYRNQKFKCGEDNDGYSVKLKMKYYVDYMKTNQDDSPLYIFDSNYGEHPKR
KRLLEDYQVPEYFEDDLFRYVGEKKRPPHRWFVMGPPRSGTGIHIDPLGTSAWNALVQGH
KRWCLFPNKTPKEMVKMKKSEGGDQVDEAVTWFNVVYPRTQRSDWPEEFKPMEIVQKPGE
TVFVPGGWWHIVLNLDSTIAVTQNFASVTNIPLVWAKTVKGRPRLSHKWIRFVLSLVIQG
HFISNQRSFP

Nucleotide sequence

Length: 1,113

>Boschl.CG.Botznik2013.chrUn.g17158.01.t
TGGAATCAGACACCCACCTTGGCCAAGGCTTCAGAGACTTCGGCGTTGTTGCGTTGCTTG
ACTGGCGGGTTGGCCGCTCACAGCTCTGGAAATACACCGTTATAATAATGTCTTCGCACA
AAAGTAGAAAGAGAATACGCGCGGCGAAAAAAGACGCCAGACCCGAATTGAAAGGTCACC
ATGGCTGGTGCGGTTTGAACTACGCCCGCACGTTCAGCCTTAGGAAAGAAGAAGTTATCG
ACACCTGCCCGAGGGAAGATGTTACCAAGATGTCAAAAGAGGAGTTCATTGAAAAGTATG
AACGACCTCTGAGACCTGTAGTGCTGTTGAATGCTCAAAAAGATTGGCTCGCGGATTATA
AATGGACTACGGATCGCCTCGTGAAAAAGTATCGTAATCAGAAATTTAAATGCGGGGAAG
ACAATGACGGATACTCTGTCAAGTTGAAGATGAAATATTACGTCGATTACATGAAAACCA
ACCAGGACGACAGCCCACTCTACATTTTCGACAGCAATTACGGGGAGCATCCGAAGCGGA
AGCGGCTTCTGGAGGATTACCAAGTTCCAGAGTACTTTGAGGATGATTTGTTCAGGTATG
TCGGGGAAAAGAAAAGACCGCCCCATCGGTGGTTCGTGATGGGACCCCCTCGTTCAGGGA
CCGGAATCCATATCGACCCACTTGGTACGAGCGCGTGGAATGCTTTGGTGCAAGGTCACA
AACGTTGGTGCCTCTTTCCGAACAAGACTCCAAAGGAAATGGTCAAAGTGAAGAAATCTG
AAGGTGGCGACCAGGTTGACGAAGCCGTGACGTGGTTCAACGTCGTCTATCCGCGAACGC
AAAGGTCGGATTGGCCGGAGGAATTCAAACCGATGGAAATTGTACAGAAGCCAGGGGAAA
CGGTTTTTGTGCCCGGCGGCTGGTGGCACATTGTTCTCAATCTGGACTCGACTATCGCTG
TGACTCAGAATTTCGCGAGCGTGACTAACATTCCTCTGGTCTGGGCCAAGACGGTGAAGG
GCCGGCCACGGTTGTCACACAAATGGATCAGGTTTGTATTGTCATTGGTCATTCAAGGTC
ACTTCATATCAAACCAGCGTTCATTCCCATAAG

InterProScan

ProSiteProfiles	JmjC_dom (IPR003347) - T[178-342] 39.326
SMART	JmjC_dom (IPR003347) - T[178-342] 2.4E-46
Pfam	JmjC_dom (IPR003347) - T[211-325] 5.8E-27

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
JMJD6_HUMAN	70.794 %	496	2.28E-176