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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'
  2. Molecular Tool 'Zinc Finger (C2H2)-24-MO'
  3. Transcript 'KH2012:KH.L18.9.v1.A...'
  4. Transcript 'Harore.CG.MTP2014.S1...'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g18652.01.t

Possible name(s)

SMARCB1

Location

chrUn [121,223,980 / 121,225,015]

Sequences

Amino acid sequence

Length: 344

>Boschl.CG.Botznik2013.chrUn.g18652.01.p
MRTYGSKPAKFQLEENGEYYMIGSEVGNYLRLFRGSLYKRYPALWRRVATADERRVIGTR
SPDLGHSTLATNVSLLKAVEVEDIFNGNDSRYKASTLSLPVDTSLAKDTSKGKRNSSWVP
SIPNSSHHLDAVPCATPISHVPKSQKRIRTFPFCYDDRDPFVNYENAEHSEVLVPIRLDM
EIDGQKVRDTFCWNKNERLITPEMFAELLCDDLDINPLTFVPLIAQAIRTQVEAFPSAGG
NLLSDQADQRVILKLNIHVGNISLVDQFEWDLSEPDNSPERFAMKLSQELGLGGEFVTAI
AYSIRGQLAGINARTRSAKIRCLVSISLCGTQGKQINGVRSWRR

Nucleotide sequence

Length: 1,035

>Boschl.CG.Botznik2013.chrUn.g18652.01.t
TGCGGACTTATGGATCGAAACCTGCAAAGTTTCAGCTTGAAGAAAATGGAGAGTATTACA
TGATAGGATCGGAAGTTGGTAACTATTTACGACTTTTCAGAGGCTCCTTGTACAAACGTT
ACCCTGCGCTATGGCGCAGAGTGGCGACAGCTGACGAGAGACGAGTAATCGGCACGAGAT
CACCTGATTTGGGCCACAGCACCCTTGCTACCAACGTATCTCTTTTAAAAGCAGTAGAAG
TTGAAGATATATTTAATGGCAATGATAGTCGCTACAAAGCATCCACTCTTTCATTGCCCG
TGGATACTTCTTTGGCAAAGGATACGTCAAAAGGCAAAAGAAATAGCTCATGGGTCCCAT
CGATTCCTAATAGCTCGCACCATCTTGACGCAGTCCCCTGTGCTACTCCGATCAGTCACG
TACCTAAATCGCAGAAGAGGATCAGAACCTTTCCCTTCTGTTACGATGACAGGGATCCAT
TTGTGAATTATGAAAATGCGGAACATTCTGAAGTTTTAGTTCCGATACGGTTGGATATGG
AGATAGATGGGCAAAAGGTTCGGGACACGTTTTGCTGGAATAAGAATGAACGGTTGATCA
CCCCCGAAATGTTCGCCGAGTTGCTATGTGACGATTTGGATATCAATCCCCTGACTTTTG
TCCCTCTTATCGCTCAAGCCATACGGACGCAAGTCGAAGCGTTCCCTTCAGCCGGCGGAA
ATCTACTCTCAGACCAGGCGGACCAACGTGTAATATTGAAGCTCAACATTCATGTGGGTA
ACATTAGCTTGGTGGATCAATTCGAATGGGATCTATCAGAGCCTGACAACAGTCCGGAAC
GTTTCGCCATGAAACTATCGCAAGAATTAGGACTCGGCGGAGAATTTGTCACGGCTATCG
CGTACAGCATAAGAGGCCAACTCGCTGGCATCAACGCACGTACGCGTTCAGCGAAAATCC
GTTGCCTAGTGTCGATATCGCTGTGCGGAACACAGGGGAAGCAGATCAATGGTGTCCGTT
CTTGGAGACGCTGAC

InterProScan

PANTHER
SNF5 (IPR006939) - T[25-309] 4.0E-82
Pfam
SNF5 (IPR006939) - T[167-235] 3.2E-23 - T[245-308] 6.7E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF5_HUMAN 65.615 % 438 1.73E-154