Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g19518.01.t

Possible name(s)

OPN1MW; OPN1MW2; OPN1MW3

Gene model

Boschl.CG.Botznik2013.chrUn.g19518

Location

chrUn [126,700,538 / 126,704,153]

Sequences

Amino acid sequence

Length: 280

>Boschl.CG.Botznik2013.chrUn.g19518.01.p
MTTRGRKALVTTCKCWSWTRINLWMFLTHAYFQGKYRIIFVIVQDLSMEGIRRKCKGHCI
TSLQCAEFYNYYVIVRWQGNFKKIQTVCGGNQAKREENSRIEETKLDTRFDGVPNTSMNV
FNTTSATTEVPPWDPFNPPYAIRVPRAVYSIIGIYMSFVLVLAIVFNGLVLYTAYKNRVV
RTPLNYIVINLTAADLIGAVCGNTLNVMANIASGFFLGKPMCVIEGATASVAGVAGLMSV
AVMAFERYFVVCKPFGPVHFTDRHAYLGICVSDIPWNFNE

Nucleotide sequence

Length: 843

>Boschl.CG.Botznik2013.chrUn.g19518.01.t
TGACGACGAGGGGCCGCAAGGCCTTAGTCACCACCTGTAAATGTTGGTCGTGGACCCGCA
TTAACTTGTGGATGTTTCTTACCCATGCCTACTTTCAAGGCAAATATCGAATCATTTTCG
TTATCGTACAGGATTTGAGTATGGAAGGCATAAGGAGAAAATGTAAAGGTCATTGCATTA
CGTCTTTGCAATGTGCTGAGTTCTATAACTATTACGTAATTGTACGGTGGCAGGGTAACT
TTAAGAAAATTCAAACTGTTTGTGGCGGTAATCAAGCAAAGCGCGAAGAAAATAGCCGAA
TTGAGGAAACCAAATTGGATACTCGTTTTGGTGGTGTACCAAATACGTCAATGAACGTCT
TCAACACCACCTCCGCAACTACAGAGGTCCCTCCGTGGGATCCGTTCAACCCGCCATATG
CTATACGAGTTCCAAGGGCAGTGTACAGCATTATAGGAATCTATATGTCTTTTGTTTTGG
TGCTGGCAATTGTCTTCAACGGTTTGGTGCTCTATACAGCGTACAAGAATAGGGTAGTGA
GAACTCCACTCAATTACATTGTCATCAACTTGACGGCGGCTGACCTCATTGGAGCAGTAT
GTGGAAACACCTTGAATGTCATGGCCAATATTGCAAGCGGATTTTTTCTCGGAAAACCCA
TGTGTGTGATTGAAGGAGCAACTGCGTCTGTTGCAGGTGTTGCTGGTCTGATGTCAGTAG
CGGTAATGGCTTTTGAGAGGTACTTCGTGGTCTGCAAACCGTTCGGTCCCGTGCATTTTA
CCGACCGACATGCCTATTTGGGTATATGCGTCAGTGATATTCCATGGAACTTCAATGAGT
AAC

InterProScan

PRINTS	GPCR_Rhodpsn (IPR000276) - T[151-175] 2.2E-10 - T[184-205] 2.2E-10 - T[229-251] 2.2E-10
ProSiteProfiles	GPCR_Rhodpsn_7TM (IPR017452) - T[166-280] 14.714
Pfam	GPCR_Rhodpsn (IPR000276) - T[167-264] 6.1E-15
ProSitePatterns	GPCR_Rhodpsn (IPR000276) - T[235-251] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
OPSG3_HUMAN	40.625 %	122	2.32E-32
OPSG_HUMAN	40.625 %	122	2.32E-32
OPSG2_HUMAN	40.625 %	122	2.32E-32