Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g19861.01.t

Possible name(s)

XBP1

Gene model

Boschl.CG.Botznik2013.chrUn.g19861

Location

chrUn [128,943,274 / 128,945,312]

Sequences

Amino acid sequence

Length: 290

>Boschl.CG.Botznik2013.chrUn.g19861.01.p
MSPVVLGTISQPRTIVVTQGLFSGDENRGELPKYAVGLFESNGSGPRKRKRLTHLTPEEK
VMRRKLKNRVAAQTARDRKKARMETLEDAVTKIHEQMNKLLDVNSTLLQRTHDLEEENMI
LRRRLGLDSSPSILEEISREAAIIKQEITDQLPNTDSPVGIKSETSDDEGCVLKSYEEPA
VMNDQIGMNVSTQEVTVCRSPVPAAFGERVKERLIPQQQEAVKPVKLIHSVTESEETSSV
SVIRMAFRTSPKKKTQTSPPYLGRCKPSILNNASLRKSIKKEMPLDLRIR

Nucleotide sequence

Length: 873

>Boschl.CG.Botznik2013.chrUn.g19861.01.t
TGTCTCCCGTCGTACTGGGCACTATTAGCCAACCTCGCACAATTGTTGTGACTCAAGGAC
TGTTCTCTGGCGATGAAAACAGAGGAGAACTTCCAAAATATGCAGTCGGCCTCTTTGAAT
CAAATGGATCGGGCCCAAGGAAAAGGAAACGTCTTACCCACCTTACTCCAGAAGAAAAAG
TCATGAGAAGGAAATTGAAAAACAGAGTCGCTGCACAGACTGCCAGAGACCGCAAAAAAG
CTAGAATGGAAACACTAGAAGATGCTGTAACAAAAATACATGAACAGGTGAATAAGTTGC
TAGACGTCAATTCGACGTTGCTCCAAAGAACGCATGATTTAGAGGAAGAAAACATGATTC
TGCGCAGAAGATTAGGACTAGACTCGTCGCCTTCCATTCTCGAAGAGATAAGCAGGGAAG
CGGCTATCATAAAGCAAGAAATTACCGATCAACTTCCAAACACTGATTCTCCAGTCGGGA
TCAAATCCGAAACATCAGGTGATGAAGGATGTGTTCTGAAATCGTATGAGGAGCCCGCCG
TCATGAATGATCAGATCGGAATGAATGTTTCCACGCAAGAAGTTACCGTTTGTCGATCCC
CCGTACCAGCAGCGTTCGGGGAACGCGTCAAGGAAAGACTTATTCCTCAGCAGCAGGAAG
CTGTCAAACCAGTGAAGCTGATCCACTCGGTAACGGAAAGCGAGGAAACATCATCCGTAT
CTGTGATTCGAATGGCGTTTCGGACCTCCCCAAAGAAGAAGACACAGACATCACCGCCCT
ACTTAGGGCGCTGCAAGCCATCGATCCTCAACAATGCATCATTACGAAAGTCGATCAAAA
AGGAAATGCCGCTGGATCTTCGGATTCGTTAAC

InterProScan

SMART	bZIP (IPR004827) - T[56-120] 6.7E-10
Pfam	bZIP (IPR004827) - T[58-119] 3.8E-9
ProSiteProfiles	bZIP (IPR004827) - T[58-121] 9.818
ProSitePatterns	bZIP (IPR004827) - T[63-78] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
XBP1_HUMAN	56.863 %	105	1.03E-26