Login
Help

TRANSCRIPT CARD

Submit your Data

  1. EST 'AHC0AAA232YE01_RM1'
  2. Transcript 'Boleac.CG.SB_v3.S73....'
  3. Transcript 'KH2012:KH.C3.74.v7.C...'
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g20016.01.t

Possible name(s)

SSTR1; SSTR2; SSTR5

Location

chrUn [129,991,844 / 129,992,478]

Sequences

Amino acid sequence

Length: 138

>Boschl.CG.Botznik2013.chrUn.g20016.01.p
MVSGLVSTFVICWLPYHSVNLARLNGIQIHASTCYAVTNFTIVLAYSNSAINPFFYTFLA
SNFRKRWGTAVGKARRGLRQSILSHSGDYTPGTSFRGRRKSSLSNSTAKNRDDISVSSFA
TKNTIVPINNTEIKEDRL

Nucleotide sequence

Length: 417

>Boschl.CG.Botznik2013.chrUn.g20016.01.t
TGGTGTCCGGTCTAGTTTCAACGTTCGTTATATGCTGGCTTCCCTACCATTCAGTTAATC
TTGCTCGTCTCAATGGCATACAAATCCACGCAAGCACCTGCTACGCTGTCACGAATTTCA
CAATAGTATTGGCTTACTCAAACAGGGCGATTAACCCGTTTTTCTACACGTTTCTGGCGT
CAAACTTTCGAAAGAGATGGGGAACTGCTGTTGGCAAGGCACGTAGAGGACTGCGACAAA
GTATTCTCAGTCACAGTGGCGACTACACACCTGGCACATCTTTCAGAGGGAGGAGAAAGT
CATCACTTTCGAACAGCACAGCTAAGAATCGCGATGACATCAGCGTGAGCTCATTTGCGA
CCAAAAACACGATTGTGCCAATTAATAACACCGAAATTAAAGAAGACAGACTTTAAT

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[1-56] 12.307
Pfam
GPCR_Rhodpsn (IPR000276) - T[2-56] 4.1E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value