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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.154.v1....' > 
  2. Transcript 'KH2012:KH.C7.154.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S732...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g20154.01.t

Possible name(s)

TMED10; TMED4; TMED9

Gene model

Boschl.CG.Botznik2013.chrUn.g20154

Location

chrUn [130,903,029 / 130,905,441]

Sequences

Amino acid sequence

Length: 177

>Boschl.CG.Botznik2013.chrUn.g20154.01.p
MLTGKYKAQLWDKRTDQFLESTPGMGMHVEVKDPAGKILLSKSYGAEGAFTFTSHTPGEH
QICIHSNSTKWSLFAGGKLRVHLDILVGEHTNDYSEIASKDKLTELQLRVRQLLDQVQQI
QKEQNYQRFREERFRQTSETTNSRVLWWSIAQTAVLVIAGMWQMRHLKGFFEAKKLV

Nucleotide sequence

Length: 534

>Boschl.CG.Botznik2013.chrUn.g20154.01.t
CATGCTCACCGGTAAGTACAAGGCGCAACTATGGGACAAGAGGACGGACCAGTTCTTGGA
GTCGACGCCTGGAATGGGAATGCACGTTGAGGTGAAAGATCCGGCTGGAAAGATTCTTCT
GTCGAAAAGCTATGGGGCGGAAGGAGCTTTCACTTTTACGTCTCACACTCCCGGAGAACA
TCAGATTTGTATTCACTCCAACTCGACCAAGTGGTCATTGTTTGCAGGTGGCAAGCTCCG
TGTGCATTTGGACATTCTGGTGGGCGAACACACAAACGATTACTCTGAGATCGCTTCCAA
AGACAAACTGACGGAACTGCAACTGAGGGTCCGCCAACTACTCGATCAAGTCCAACAAAT
CCAGAAGGAACAAAACTACCAGCGCTTCAGAGAGGAGAGATTTCGACAGACCAGCGAGAC
CACAAACTCTCGCGTTCTCTGGTGGTCGATCGCTCAGACCGCGGTCCTGGTGATCGCCGG
GATGTGGCAGATGCGACATTTGAAGGGATTCTTCGAAGCTAAAAAACTTGTTTG

InterProScan

SMART
GOLD_dom (IPR009038) - T[1-172] 8.3E-55
ProSiteProfiles
GOLD_dom (IPR009038) - T[1-110] 13.867
PANTHER
TMP21-related (IPR015720) - T[1-177] 8.9E-102
Pfam
GOLD_dom (IPR009038) - T[2-172] 1.6E-44

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED9_HUMAN 74.011 % 287 4.75E-100
TMED4_HUMAN 75.706 % 299 1.25E-104
TMEDA_HUMAN 35.669 % 97.8 1.2E-25