Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g21321.01.t

Possible name(s)

AC011455.3; SARS2

Gene model

Boschl.CG.Botznik2013.chrUn.g21321

Location

chrUn [138,729,543 / 138,732,322]

Sequences

Amino acid sequence

Length: 296

>Boschl.CG.Botznik2013.chrUn.g21321.01.p
MSKVSLLIRTYYLFQQGAELEQALVRYALDVLKKRGFLLMSCPNILHGSVFEGCGIPVSK
LPGMLYRIDPKQDKEFYISGTSEIGIAGYFANHAVPIKHLPLKICCISTCNRKETDSTAE
AKGLYRVHHFTKVEMFGVTANETGSESEELFEEFQEIQELLFSNLGLHFRILDMPTEELA
LPAYRKVDMEAWMSHRASYGEISSTSNCTDFQSRRLHILYKTGNDYKFAHTINGTACAVP
RVLLALYENNQKEKTVHLPEVLMEHMSSMDINRKSKIAMEYIGPNQSKKKQKSPKE

Nucleotide sequence

Length: 891

>Boschl.CG.Botznik2013.chrUn.g21321.01.t
TGTCAAAAGTGTCTTTGTTGATCAGAACATATTACTTATTCCAACAAGGCGCCGAACTGG
AGCAGGCTCTGGTGCGCTATGCGTTGGATGTTCTGAAGAAACGTGGATTCCTGCTGATGT
CGTGCCCAAACATTCTTCACGGCTCTGTTTTTGAAGGCTGTGGCATTCCAGTTTCCAAGC
TGCCTGGGATGCTGTATCGCATTGACCCGAAGCAAGATAAAGAATTTTACATTTCCGGCA
CCTCTGAAATCGGAATAGCCGGGTATTTTGCGAACCATGCAGTACCCATAAAGCATCTGC
CGCTAAAGATTTGCTGTATTAGTACTTGTAATAGAAAAGAAACTGGTAGCACTGCGGAAG
CTAAAGGACTTTATCGGGTGCACCACTTCACCAAGGTCGAGATGTTTGGGGTAACGGCAA
ATGAGACCGGGTCAGAGAGCGAAGAACTTTTCGAGGAATTCCAAGAAATTCAAGAGCTTC
TATTTTCAAATCTCGGTTTACATTTTAGGATCCTTGATATGCCGACCGAAGAACTTGCAC
TACCTGCGTATCGAAAGGTTGACATGGAAGCATGGATGTCTCACAGGGCGTCGTACGGCG
AAATATCTAGCACTTCTAATTGCACAGACTTTCAAAGCAGGAGATTACATATTTTGTATA
AAACAGGCAACGATTATAAGTTTGCACACACTATAAATGGTACTGCCTGTGCCGTCCCAA
GGGTACTGCTCGCTCTTTACGAAAACAACCAAAAGGAAAAAACAGTCCATCTTCCTGAAG
TGCTGATGGAACACATGAGTAGCATGGATATAAACAGAAAAAGCAAAATTGCAATGGAGT
ATATTGGTCCAAATCAGTCAAAAAAAAAGCAGAAATCTCCCAAAGAGTGAC

InterProScan

ProSiteProfiles	aa-tRNA-synth_II (IPR006195) - T[1-259] 18.57
PANTHER	Ser-tRNA-ligase_type_1 (IPR002317) - T[9-279] 2.1E-114
Pfam	aa-tRNA-synt_IIb (IPR002314) - T[66-250] 2.5E-25
PRINTS	Ser-tRNA-ligase_type_1 (IPR002317) - T[125-138] 1.4E-11 - T[185-201] 1.4E-11 - T[203-219] 1.4E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SYSM_HUMAN	50.883 %	316	1.85E-105
SYSC_HUMAN	34.317 %	150	6.81E-42