- Transcript 'KH2012:KH.C7.730.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C7.526.v3....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g21881.01.t
Possible name(s)
CIAO1; KATNB1; WDR33
Gene model
Location
chrUn [142,627,723 / 142,634,045]
Amino acid sequence
Length: 316
>Boschl.CG.Botznik2013.chrUn.g21881.01.p
MAWSKHESWLITGDNQGYIKYWQLNMNNVKMYQAHKDQACRSVAWHPMKGIVASASKDLH
TPVKLWDPKSGQSLITLHAHKGTVMDVKWNQNGNWLLSASRDHLVKLYDIRNLKQEMQVF
RGHKKEAFSVAWHPIHENLFASGGSEGSILFWHVGEEKEAGTLEGAHDSLIWSLEWHPLG
HVLVSGSNDHSTKFWTRSKPGDLMRDRYNQALLPQTHDDTSTTVGTSRTVDPANESPFIP
GMGDADVAEAEVAKREQEEQKYGIPGLDWSYEEKNEFERKILNQHDRKKAPYARPVPRAF
VAAWEANKEGRPADRD
Nucleotide sequence
Length: 948
>Boschl.CG.Botznik2013.chrUn.g21881.01.t
GATGGCTTGGTCCAAACACGAAAGCTGGCTCATTACCGGCGACAACCAGGGATACATAAA
ATATTGGCAATTGAACATGAACAACGTGAAAATGTATCAAGCGCACAAGGACCAGGCTTG
CCGCTCGGTCGCCTGGCATCCGATGAAGGGGATCGTGGCGTCGGCGAGTAAAGACTTGCA
CACGCCCGTCAAGTTGTGGGACCCGAAAAGCGGGCAGAGTCTCATCACTCGTCACGCGCA
CAAAGGCACTGTGATGGATGTGAAGTGGAATCAGAACGGAAATTGGTTGCTGTCAGCTTC
GAGGGATCATCTTGTGAAGCTTTACGACATCAGAAATTTGAAACAGGAAATGCAGGTATT
TCGCGGTCACAAGAAGGAAGCGTTTTCAGTAGCGTGGCACCCGATACACGAAAACCTGTT
TGCCAGCGGAGGCTCGGAAGGCAGTATTCTGTTTTGGCATGTCGGCGAAGAGAAAGAAGC
CGGTACTCTGGAAGGCGCGCACGACAGTTTGATATGGAGTTTGGAATGGCATCCTCTGGG
ACACGTACTGGTGTCTGGATCCAACGACCACAGCAGAAAATTCTGGACGCGAAGCAAGCC
CGGAGATTTGATGCGGGACCGGTACAATCAAGCGTTACTGCCACAGACGCACGACGACAC
TTCCACTACCGTCGGGACGTCGAGGACTGTCGATCCGGCGAACGAAAGCCCCTTCATCCC
AGGGATGGGAGATGCCGATGTCGCGGAAGCAGAAGTAGCCAAGAGGGAGCAGGAAGAGCA
GAAATACGGAATCCCCGGTCTGGACTGGTCCTACGAAGAGAAAAACGAGTTTGAACGAAA
GATACTGAACCAGCACGACCGCAAAAAAGCGCCTTACGCACGCCCGGTGCCGAGAGCGTT
CGTGGCGGCGTGGGAGGCCAACAAGGAGGGCCGTCCGGCCGACAGGGA
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[1-198] 3.26E-46 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-114] 1.1E-25 - T[115-263] 8.4E-22 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-205] 33.353 |
| SMART |
WD40_repeat (IPR001680) - T[25-67] 7.2E-4 - T[70-109] 2.3E-9 - T[113-153] 4.1E-6 - T[156-196] 1.0E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[71-109] 5.7E-7 - T[115-152] 0.055 - T[162-195] 6.4E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[77-118] 12.915 - T[120-162] 10.943 - T[164-195] 11.377 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KTNB1_HUMAN | 33.152 % | 94 | 2.49E-21 |
| WDR33_HUMAN | 51.811 % | 361 | 3.11E-115 |
| CIAO1_HUMAN | 31.928 % | 82.8 | 6.15E-18 |