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TRANSCRIPT CARD

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  1. Clone 'cign051j16' > 
  2. Clone 'cien194124' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g21989.01.t

Possible name(s)

DES; GFAP; VIM

Gene model

Boschl.CG.Botznik2013.chrUn.g21989

Location

chrUn [143,217,380 / 143,218,857]

Sequences

Amino acid sequence

Length: 215

>Boschl.CG.Botznik2013.chrUn.g21989.01.p
MTEERMSSYKRHFGGCRSLFDYSSESTRKATSHHGANNYSRVSFRQLPSFVDENVSLRRS
IPVNSSVTMTEINNMEDSLGERFQDMRINEKAELQCLNNRFVDYISKVRNLEQSNRVLEE
KLAQLSAVGPSRVGEMYEAEINRLRRQIDTTVSEKSSLEMRLENSLIDAAKWKEMYEEEQ
TSRKEMEEDLQGMRKDCDDATLVRLDMERRLETLQ

Nucleotide sequence

Length: 645

>Boschl.CG.Botznik2013.chrUn.g21989.01.t
AATGACCGAAGAAAGGATGTCTAGTTACAAACGGCATTTCGGAGGATGCAGATCGCTTTT
CGATTACTCAAGCGAGTCTACCCGAAAAGCAACTTCACATCATGGAGCCAACAGCTACTC
CAGAGTCAGTTTCCGCCAATTACCATCTTTCGTCGATGAAAATGTGTCGCTGAGACGGAG
CATCCCTGTTAACAGCAGCGTTACGATGACAGAGATCAACAACATGGAGGATAGTTTGGG
AGAAAGATTTCAAGACATGCGTATCAATGAAAAGGCGGAATTGCAATGTCTCAATAACAG
ATTTGTCGATTATATTTCGAAGGTGCGCAATTTGGAGCAATCGAATAGGGTATTAGAAGA
AAAACTTGCGCAGTTATCGGCTGTCGGACCTTCCAGAGTTGGTGAGATGTACGAGGCCGA
AATAAACAGATTGCGTCGTCAAATAGATACGACTGTTAGTGAGAAATCGTCTTTGGAAAT
GCGTTTGGAGAATTCTCTCATCGATGCCGCCAAGTGGAAAGAAAGGTATGAGGAAGAACA
GACTTCCAGAAAAGAAATGGAAGAAGATTTGCAAGGTATGAGAAAGGACTGCGACGACGC
AACTCTAGTAAGACTTGATATGGAGAGAAGGCTGGAAACACTTCA

InterProScan

PANTHER
IF (IPR001664) - T[41-215] 3.4E-39
Pfam
IF (IPR001664) - T[89-215] 3.5E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIME_HUMAN 42.424 % 126 3.1E-34
GFAP_HUMAN 37.324 % 99.4 2.27E-24
DESM_HUMAN 40.426 % 90.5 3.1E-21