Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L149.2.v1....' > 
  2. Transcript 'KH2012:KH.C2.52.v2.A...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  4. Transcript 'KH2012:KH.L37.6.v1.A...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g22079.01.t

Possible name(s)

VIPAS39

Gene model

Boschl.CG.Botznik2013.chrUn.g22079

Location

chrUn [143,817,084 / 143,821,994]

Sequences

Amino acid sequence

Length: 232

>Boschl.CG.Botznik2013.chrUn.g22079.01.p
MSRPAAVSHYCSYLRRTSEIEELHEILTILGDTEEAAMLKYRHCLRCAKSAEVRRDSLKD
CVKYYFDSDPRLAGETKEILDQISLLARQIIVDENDKKTQDSEKPSIFKTHPIREPTVHR
SLTATLYYCCYYHWGEAEGILSSPMSLKHEFKIGEKQYAYMAVAALCRMRKWRELEQFLT
TPKTLFRGPKLHSVIGFDKVVDVLSKNMAPLDVSTRFALNLLWSVFSQISFA

Nucleotide sequence

Length: 699

>Boschl.CG.Botznik2013.chrUn.g22079.01.t
GATGAGCAGACCGGCGGCCGTGAGTCACTACTGTTCCTATCTCCGTCGTACGTCGGAAAT
TGAGGAGCTTCATGAAATTCTGACCATACTCGGAGACACAGAAGAGGCGGCCATGCTGAA
ATACAGGCACTGTTTGCGGTGCGCCAAGTCTGCCGAAGTCAGACGGGACTCGCTCAAAGA
CTGTGTCAGATATTACTTCGATTCCGACCCGCGCCTCGCCGGCGAGACCAAAGAGATATT
GGACCAGATCTCACTCCTGGCACGTCAGATTATCGTGGACGAAAACGACAAGAAGACCCA
GGACTCGGAGAAACCTTCCATCTTCAAAACCCACCCGATACGCGAACCCACCGTACACAG
ATCGCTGACCGCCACGCTGTATTACTGCTGCTATTATCACTGGGGAGAGGCTGAGGGTAT
TCTGAGCAGTCCCATGTCGCTGAAACACGAATTTAAAATCGGGGAGAAGCAGTACGCTTA
TATGGCTGTGGCCGCGTTATGTCGAATGCGAAGGTGGCGGGAGCTGGAACAGTTTCTGAC
TACTCCGAAAACGCTTTTTCGCGGGCCCAAACTGCACTCCGTTATAGGATTCGATAAAGT
TGTCGATGTCTTGAGCAAGAACATGGCGCCGCTTGACGTTAGTACCCGATTTGCTCTGAA
TCTGTTATGGAGTGTTTTTTCCCAGATATCTTTCGCGTA

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[1-215] 6.8E-14
Pfam
Vps16_C (IPR006925) - T[147-181] 2.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 34.348 % 122 2.87E-32