Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g23217.01.t

Possible name(s)

WWC1; WWC2; WWC3

Gene model

Boschl.CG.Botznik2013.chrUn.g23217

Location

chrUn [151,345,773 / 151,347,181]

Sequences

Amino acid sequence

Length: 468

>Boschl.CG.Botznik2013.chrUn.g23217.01.p
YDGKSFFIDHNTKRTTWIDPRDCLAKPRTFADCAGGELPVGWERCNDPNIGVYFINHITK
HNQKEDPHESWKTTQQKMLEDYIHSALADIELQEEVFKIKQERLNLAENTMHTLQQRVKR
HASCKSTGSSQYVHDTASNGSSVSGSNWSISTKFDPDEIRFEIDETRRRVAHLRHELSYI
EANIYSAKAKHRQWASQQDSGCVMNSCEHLHGHDGHCCRPQLADFRASQEHLLCSLEESK
QKIADLNAEKQNLELLGSKDGNPQTLLLISEKKELLNELYSQKASCKATEEEKNQIVRRC
RELERELKDAKHVNNRALGDRLMRAEKLRWINSKIDMEIQHTGDIRGQLQKLSCSSGSLS
STSSQSSSKSGSPSGQPFGYRNNSMTRGRARAVRDSLRRNSSRCSDIGPRLNVSAHIAVD
GYECSNDPMLPPHMMYSDHRDGAISMSSSVCSLQSQNNNMSMQIRGGT

Nucleotide sequence

Length: 1,408

>Boschl.CG.Botznik2013.chrUn.g23217.01.t
TATGATGGCAAGTCGTTTTTCATCGACCACAACACCAAGCGTACTACGTGGATAGATCCA
CGCGACTGCCTCGCGAAACCCCGTACTTTTGCCGACTGCGCGGGGGGAGAACTGCCAGTC
GGTTGGGAGAGATGTAACGATCCTAACATCGGGGTGTATTTTATAAACCATATCACGAAG
CATAATCAGAAGGAAGACCCGCACGAATCTTGGAAAACGACACAGCAGAAAATGCTGGAG
GATTACATTCACAGCGCCCTTGCCGACATCGAACTGCAAGAGGAGGTATTCAAAATCAAA
CAAGAGCGACTGAACTTGGCGGAAAACACCATGCACACCCTGCAGCAGCGTGTGAAAAGG
CACGCCAGTTGTAAGTCGACGGGTTCCAGCCAATATGTGCACGACACCGCCTCAAATGGT
AGTTCAGTGTCTGGTTCGAACTGGTCAATCAGTACAAAATTTGATCCTGACGAAATTCGA
TTTGAAATCGACGAAACGAGGAGACGCGTCGCCCATCTGCGGCACGAGCTTTCCTACATC
GAGGCTAATATTTATTCGGCGAAAGCGAAACACCGACAATGGGCGAGTCAGCAAGACAGC
GGTTGCGTCATGAACTCGTGCGAGCACTTGCACGGGCACGACGGTCACTGCTGCAGGCCG
CAGTTGGCCGATTTCCGCGCGTCGCAGGAGCATCTGCTGTGCAGTCTTGAGGAATCAAAG
CAGAAAATCGCAGATTTGAACGCGGAAAAACAAAATTTAGAACTTTTAGGGTCAAAAGAC
GGGAATCCGCAGACGTTGCTGTTGATTTCTGAGAAAAAGGAATTGCTGAACGAACTCTAC
AGTCAAAAGGCGAGTTGCAAAGCGACGGAAGAGGAAAAAAATCAAATAGTGCGACGTTGT
CGGGAGCTAGAGAGAGAGCTGAAAGACGCGAAGCACGTTAACAATCGCGCGTTAGGCGAT
AGACTGATGCGCGCCGAAAAGTTACGATGGATCAACTCCAAAATCGATATGGAGATACAA
CACACTGGTGACATAAGAGGACAATTGCAAAAACTATCTTGCAGCTCTGGCTCGTTGTCT
TCCACATCAAGTCAGAGCTCTAGTAAATCCGGCAGTCCGAGCGGGCAACCGTTTGGCTAC
CGCAATAACTCTATGACACGTGGCAGAGCCAGGGCGGTTCGGGATAGTTTACGGCGAAAT
TCGTCTAGATGTTCCGATATCGGGCCGAGACTTAACGTGAGTGCTCATATCGCAGTCGAT
GGGTATGAATGTTCCAACGATCCCATGTTACCGCCGCATATGATGTATTCTGACCACCGT
GATGGCGCGATATCCATGTCGTCGAGTGTGTGTTCCTTACAAAGTCAAAATAATAATATG
TCAATGCAAATCCGTGGAGGTACTTAGC

InterProScan

ProSiteProfiles	WW_dom (IPR001202) - T[1-22] 10.817 - T[36-69] 11.487
SUPERFAMILY	WW_dom_sf (IPR036020) - T[2-21] 7.15E-5 - T[36-69] 5.26E-8
SMART	WW_dom (IPR001202) - T[2-22] 4.6 - T[37-69] 7.9E-4
CDD	WW_dom (IPR001202) - T[2-22] 3.59065E-6 - T[39-69] 1.88527E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MAGI3_HUMAN	44.944 %	84.7	2.75E-17
WWC2_HUMAN	45.652 %	163	2.67E-43
KIBRA_HUMAN	36.715 %	140	1.04E-35