- Transcript 'KH2012:KH.C1.26.v5.A...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Clone 'cibd059h20' >
- Transcript 'KH2012:KH.C7.628.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g23327.01.t
Possible name(s)
GLI3; GLIS1; GLIS3
Gene model
Location
chrUn [152,056,308 / 152,061,052]
Amino acid sequence
Length: 357
>Boschl.CG.Botznik2013.chrUn.g23327.01.p
TLEDLVKHIEKNHIDQRKGEEFICYWNGCPRKCKPFNARYKLVIHMRVHSGERPNKCSFE
GCTKAFSRLENLKIHMRSHTGERPYVCGKDGCEKAFSNSSDRAKHQRTHQDRKPYACEIP
GCNKRYTDPSSLRKHIKSHAHMKKRKNEPDLVSCMTIHPLTVRQDAYSTDRHVKTEKSTL
PPAPQSNHLTQHLGAMPQAIHRSAHGNHNSELSRHYDAEQHSNRHMMEANRHEQTLQQLM
PPPTGPPLVRRQVNARSGMHPTSAGRSVSSQSPMMVDSRMDLGSRPEYYSLSRASNNRDM
IGAQTPDKKTDDFEKFSTDVTVLTKKKGHHFDSTPDLPDILRAYDVRCVGVAIFVAF
Nucleotide sequence
Length: 1,074
>Boschl.CG.Botznik2013.chrUn.g23327.01.t
GACATTGGAAGATCTAGTGAAACACATCGAGAAGAATCACATCGACCAACGCAAGGGCGA
AGAATTCATCTGCTACTGGAACGGATGCCCGCGGAAGTGCAAGCCGTTCAACGCGCGATA
CAAGCTCGTTATACACATGCGAGTTCATTCGGGTGAAAGGCCGAACAAGTGTTCGTTCGA
AGGATGTACAAAAGCTTTCTCGCGCCTGGAGAACCTGAAAATCCACATGAGGTCGCACAC
CGGCGAGAGGCCGTACGTTTGCGGCAAGGACGGATGCGAAAAGGCTTTCAGCAACTCTTC
CGACCGGGCAAAGCATCAGCGCACCCATCAGGATCGGAAACCATACGCATGCGAAATTCC
AGGCTGTAACAAACGCTACACCGATCCTTCATCGCTTCGGAAGCATATCAAGTCACACGC
TCACATGAAGAAGAGAAAAAACGAACCGGATCTTGTATCTTGCATGACTATTCATCCGTT
AACAGTACGTCAAGACGCCTATTCAACGGACCGCCACGTGAAGACGGAAAAATCCACGCT
ACCGCCCGCGCCGCAAAGCAACCACCTCACGCAACACCTAGGCGCTATGCCGCAAGCGAT
CCACAGATCCGCGCACGGTAACCACAACTCAGAACTGTCTCGCCATTACGACGCAGAGCA
ACACAGCAATCGTCACATGATGGAAGCCAACAGGCACGAACAGACGCTTCAACAGTTGAT
GCCGCCACCGACTGGTCCGCCGTTGGTGCGGAGACAAGTGAACGCGCGGTCGGGAATGCA
CCCGACCAGCGCTGGGAGGAGTGTGTCGTCGCAATCGCCTATGATGGTCGACTCCCGGAT
GGACTTGGGCTCGAGGCCTGAGTACTATTCCTTGTCCAGAGCTTCTAATAACAGAGACAT
GATCGGAGCTCAAACACCGGACAAGAAAACTGATGATTTTGAAAAATTTTCGACCGACGT
TACTGTGTTGACTAAAAAAAAGGGTCATCACTTTGACTCGACTCCCGATTTACCCGATAT
TTTACGAGCCTATGACGTTCGCTGCGTCGGAGTCGCAATTTTCGTGGCATTTTA
| PANTHER |
GLIS3 (IPR030405) - T[3-275] 4.1E-101 |
| SMART |
Znf_C2H2_type (IPR013087) - T[22-49] 4.8 - T[55-79] 0.0016 - T[85-109] 0.017 - T[115-139] 8.3E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[27-54] 10.242 - T[55-84] 14.648 - T[85-114] 13.214 - T[115-144] 11.448 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[36-94] 1.26E-18 - T[79-135] 2.72E-12 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[57-79] . - T[87-109] . - T[117-141] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI3_HUMAN | 64.238 % | 209 | 2.07E-60 |
| GLIS3_HUMAN | 67.797 % | 261 | 1.32E-80 |
| GLIS1_HUMAN | 55.159 % | 254 | 3.21E-79 |