- Transcript 'KH2012:KH.S1107.2.v2...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- EST 'AHC0AAA226YL05_RM1' >
- Transcript 'Boleac.CG.SB_v3.S442...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g23568.01.t
Possible name(s)
DAW1; ELP2; NLE1
Gene model
Location
chrUn [153,736,492 / 153,738,166]
Amino acid sequence
Length: 557
>Boschl.CG.Botznik2013.chrUn.g23568.01.p
MDKSLVLWKLDTENQIWIEDARFGEVGGNTLGFYGAYFSPDNREILAHSYNGALHLWEKS
DGFDSWKTGVVISGHFGAVLDLSWEPHFGRYIVTTSTDQTTRLFSKWSLGQKYSWHEIAR
PQVHGYDMQSVAMIDSYRFVSGADEKVLRVFEAPDTFIKNFETLTRVVLERSSPGPEGAT
VPALGLSNKAVFSTESQSNQETPATRGEQYIENQFKKCLIYQPPTEEYLLQNSLWPETHK
LYWHVYEIFCVAANSSGTLVATTAKASTPEHSTIVLWDTNSWKDVGQLRGHTLTVTQIEF
SPDGNFLLSVSRDRTWILHEIAGDRHSGYSTRIFARSDKKTCHSRIIWSASWTHDSKFFC
TGSRDKKLMFWKVASSNSTNQSTGDNILVEKVLVVNFTVAITAVAFSKSYINGSDYLLAI
GKENGHIELNTFAISPQFQCSMLRAFDVNESHGTCVKRMKWRPMQQESDEHYLASCGADN
MFKIFSVSQCQANQLIGNNCNAACYSMLVCVYRTPSSFYEGNYGNKNAPQSCVENGAKTI
IPLSVVVPRHPIQYVKC
Nucleotide sequence
Length: 1,674
>Boschl.CG.Botznik2013.chrUn.g23568.01.t
CATGGATAAGTCGTTGGTATTATGGAAGTTGGACACAGAAAATCAAATTTGGATTGAAGA
TGCACGATTCGGTGAAGTTGGTGGCAACACTCTTGGTTTTTATGGAGCTTATTTCAGTCC
CGACAATCGAGAGATACTAGCGCACAGCTACAACGGAGCCCTGCATTTATGGGAAAAATC
TGATGGATTTGATTCATGGAAAACTGGAGTAGTTATTTCCGGACATTTCGGGGCTGTGTT
AGATTTATCGTGGGAGCCCCATTTCGGACGATACATTGTCACAACCAGTACCGATCAAAC
CACACGGCTGTTCTCAAAATGGTCACTTGGTCAAAAGTATTCCTGGCACGAAATCGCTCG
TCCGCAAGTTCACGGCTACGATATGCAATCAGTTGCGATGATTGACAGCTACCGGTTTGT
ATCAGGCGCCGATGAAAAAGTACTGCGGGTCTTCGAAGCTCCTGATACATTTATTAAAAA
CTTTGAAACATTAACCCGAGTCGTGCTAGAAAGGAGCTCACCTGGCCCGGAAGGTGCCAC
TGTCCCTGCTTTGGGGTTATCAAATAAAGCTGTGTTTTCCACTGAATCTCAATCGAATCA
AGAAACTCCGGCCACTCGTGGTGAGCAATATATTGAAAATCAATTCAAAAAATGTCTAAT
ATACCAGCCGCCTACGGAAGAATACTTACTTCAAAACTCATTGTGGCCAGAAACACATAA
GCTGTATTGGCACGTGTATGAGATATTCTGTGTTGCTGCGAATTCATCGGGTACACTAGT
GGCCACAACAGCCAAGGCATCTACTCCTGAGCATTCTACAATTGTACTTTGGGACACTAA
TTCGTGGAAGGACGTGGGACAGCTACGTGGACATACACTGACTGTTACTCAGATTGAATT
CAGTCCCGACGGTAACTTCTTACTGTCAGTTTCTAGAGATAGAACTTGGATTTTGCATGA
GATAGCTGGCGATCGCCACTCTGGTTACTCGACTAGGATATTCGCAAGATCGGATAAGAA
GACATGCCATAGTAGGATAATATGGTCGGCGTCCTGGACTCACGACAGTAAATTCTTCTG
TACCGGTTCTCGCGATAAAAAACTTATGTTCTGGAAAGTTGCTAGCAGTAATTCAACAAA
CCAATCGACTGGCGATAATATCCTCGTAGAGAAAGTACTTGTTGTTAATTTCACTGTGGC
AATCACAGCCGTTGCTTTTTCCAAATCATACATCAACGGTTCCGACTATCTCCTTGCAAT
AGGTAAAGAGAATGGACATATAGAACTGAATACTTTTGCGATTTCGCCACAATTTCAATG
TTCCATGCTTCGAGCGTTCGATGTGAACGAGTCACACGGTACCTGCGTCAAACGCATGAA
ATGGCGGCCAATGCAACAGGAAAGTGATGAACACTATTTGGCTTCGTGTGGTGCTGATAA
TATGTTCAAAATATTCTCGGTTTCTCAGTGCCAGGCAAACCAGTTGATCGGTAATAACTG
TAATGCTGCTTGTTACTCTATGCTAGTGTGTGTTTATAGAACCCCATCATCGTTTTATGA
AGGAAATTATGGAAATAAAAATGCACCCCAGTCTTGTGTCGAAAATGGGGCCAAGACCAT
TATTCCCCTCTCCGTTGTGGTGCCTAGACATCCTATACAATATGTAAAGTGTTG
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-114] 12.842 - T[241-381] 15.241 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-191] 5.7E-16 - T[213-331] 8.5E-17 - T[332-514] 2.6E-14 |
| PANTHER |
Elp2 (IPR037289) - T[1-489] 4.7E-183 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[7-162] 8.04E-35 - T[218-374] 8.04E-35 - T[452-491] 8.04E-35 |
| SMART |
WD40_repeat (IPR001680) - T[19-58] 180.0 - T[65-105] 0.0066 - T[114-152] 87.0 - T[234-278] 6.1 - T[281-320] 1.9E-6 - T[327-372] 0.0032 - T[439-486] 26.0 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[72-105] 9.005 - T[288-315] 9.907 - T[340-381] 10.341 |
| Pfam |
WD40_repeat (IPR001680) - T[284-315] 8.5E-4 - T[341-372] 0.0029 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ELP2_HUMAN | 44.316 % | 417 | 3.87E-137 |