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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g23904.01.t

Possible name(s)

gBoschl.CG.Botznik2013.chrUn.g23904

Location

chrUn [155,881,860 / 155,883,833]

Sequences

Amino acid sequence

Length: 238

>Boschl.CG.Botznik2013.chrUn.g23904.01.p
MDWGRVPECVKFYGTGSLTTGSGDMLHVDKTTKNWRRWVYHKQHKKIPDLCVNMYGNKRL
IERIETAAIAIKSGYKHVAEEQFQHTMAEARDQLSNARSDSAEALDRLGKICLQVADWAK
AITCFEYSYHMRRVIYGLETDHCKTLESLIYLGTSWAEYENLHRAIIVFEKALEMAKNLS
EKGANRDERVAEVLHNLGCCWERLHEHHTALSCYEKSEKIRRTISTPAACASAPRYLN

Nucleotide sequence

Length: 717

>Boschl.CG.Botznik2013.chrUn.g23904.01.t
CATGGATTGGGGCCGGGTCCCAGAATGCGTGAAATTCTACGGCACGGGTAGTCTTACGAC
AGGCTCCGGCGATATGCTACATGTGGACAAGACCACCAAAAATTGGAGGCGGTGGGTCTA
TCACAAGCAGCATAAGAAAATACCGGATCTGTGCGTGAATATGTACGGTAACAAAAGACT
CATTGAAAGAATAGAGACTGCCGCTATTGCTATAAAATCAGGTTATAAGCATGTCGCCGA
AGAACAATTTCAACACACAATGGCAGAAGCCAGAGACCAACTGTCCAACGCGCGATCAGA
CAGCGCGGAAGCGCTTGACAGACTAGGAAAAATCTGCCTTCAAGTTGCTGACTGGGCAAA
AGCGATAACTTGCTTCGAATACTCGTATCATATGCGTCGGGTGATTTACGGTTTGGAAAC
TGATCACTGCAAGACCCTCGAGTCGCTGATCTATCTCGGAACATCGTGGGCCGAATATGA
AAATCTACACAGGGCCATCATCGTGTTCGAAAAAGCTTTGGAAATGGCTAAAAATCTATC
GGAGAAAGGTGCGAATCGCGACGAGCGAGTGGCGGAAGTGCTGCACAACCTGGGATGTTG
CTGGGAGCGACTTCACGAACACCACACCGCGTTGTCCTGTTACGAAAAGTCGGAAAAAAT
ACGCAGAACGATTTCGACTCCGGCGGCTTGCGCATCCGCCCCGCGATACTTGAATTG

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[82-236] 2.2E-19
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[92-221] 1.76E-14
ProSiteProfiles
TPR_repeat (IPR019734) - T[102-135] 5.694 - T[146-179] 8.29 - T[191-224] 6.402
SMART
TPR_repeat (IPR019734) - T[102-135] 55.0 - T[146-179] 13.0 - T[191-224] 0.027
Pfam
TPR_repeat (IPR019734) - T[104-133] 4.4E-4 - T[194-216] 0.0089
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[146-179] 8.587 - T[191-224] 6.566

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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