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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g23994.01.t

Possible name(s)

RPL19

Location

chrUn [156,440,442 / 156,443,946]

Sequences

Amino acid sequence

Length: 198

>Boschl.CG.Botznik2013.chrUn.g23994.01.p
MSTLRLQKRLASVVMKCGKNKVWLDPNETSMISNANSRQNVRKLIKDGLIIRKPVAVHSR
ARVRKNTIARRKGRHCGRGKRKGTANARMPQKVIWIRRMRVLRRLLRKYRESKKIDKHMY
HELYLKVKGNGFKNKRVLMEHIHKEKARKSRAKMFYDQAEARRQKNKEARRRREERIQAK
TKELLSALAKEDEALKRE

Nucleotide sequence

Length: 597

>Boschl.CG.Botznik2013.chrUn.g23994.01.t
CATGAGTACCCTAAGACTGCAGAAACGGTTGGCCTCCGTTGTCATGAAATGTGGCAAAAA
CAAGGTATGGCTCGACCCGAACGAAACCTCCATGATTTCGAATGCCAATTCTGGTCAGAA
TGTACGGAAATTAATAAAGGATGGTCTTATTATCCGAAAGCCGGTTGCTGTCCATTCCCG
TGCTCGTGTGAGGAAGAACACGATCGCAAGACGCAAGGGTAGACATTGTGGAAGAGGTAA
AAGGAAGGGTACTGCGAATGCTCGTATGCCGCAAAAGGTCATCTGGATCAGGCGTATGCG
TGTTCTGAGACGACTCTTGAGGAAATACAGAGAATCAAAAAAAATTGACAAGCATAGGTA
CCACGAACTCTACTTGAAGGTGAAGGGTAATGGCTTCAAAAACAAGCGAGTTCTAATGGA
ACACATTCATAAAGAGAAAGCCAGAAAATCCAGAGCCAAGATGTTCTGCGATCAAGCCGA
GGCTCGTCGACAGAAGAACAAGGAGGCGAGAAGGCGCCGAGAGGAGAGAATCCAAGCCAA
GACCAAGGAGCTTTTATCCGCATTGGCCAAAGAGGACGAGGCATTGAAGAGGGAATG

InterProScan

Gene3D
Ribosomal_L19/L19e_dom1 (IPR015972) - T[1-56] 1.5E-31
SMART
Ribosomal_L19/L19e (IPR000196) - T[3-146] 5.7E-94
SUPERFAMILY
60S_ribosomal_L19/L19e_sf (IPR035970) - T[3-144] 2.75E-64
Hamap
Ribosomal_L19/L19e (IPR000196) - T[3-149] 20.216
Pfam
Ribosomal_L19/L19e (IPR000196) - T[4-146] 1.9E-65
CDD
Ribosomal_L19_euka (IPR033935) - T[4-167] 5.95745E-76
ProSitePatterns
Ribosomal_L19/L19e_CS (IPR023638) - T[7-26] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL19_HUMAN 77.32 % 278 1.27E-96