Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'ma103g15' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g24445.01.t

Possible name(s)

ARFGAP1; ARFGAP2; ARFGAP3

Gene model

Boschl.CG.Botznik2013.chrUn.g24445

Location

chrUn [159,552,049 / 159,555,008]

Sequences

Amino acid sequence

Length: 205

>Boschl.CG.Botznik2013.chrUn.g24445.01.p
MEAPFNDIKSIFKKQRSIPTNKTCFDCGAKNPTWASITYGVYLCIDCSGVHRSLGVHLTF
IRSTQLDQKWTWDQLRSMQVGGNANARAFFRSHGCSSNDIQTKYNSRAAVLYRGKLKSMT
VEALKKYDNSVLHISSQNSPAETISSSSQAEDDFFSKYGGASMSKNPSLASNQSPKLGRT
TEGLKHVSSSPAVISLSTDDKGQLQ

Nucleotide sequence

Length: 618

>Boschl.CG.Botznik2013.chrUn.g24445.01.t
CATGGAGGCTCCGTTTAATGATATCAAAAGCATATTCAAGAAGCAAAGATCCATTCCTAC
AAATAAGACATGTTTTGACTGTGGCGCGAAGAACCCAACTTGGGCCAGCATAACATACGG
TGTGTACTTATGTATAGACTGTTCCGGCGTTCACAGATCACTGGGAGTCCATTTAACATT
TATCAGATCCACTCAACTGGACCAAAAGTGGACATGGGACCAATTACGGAGTATGCAAGT
CGGCGGTAACGCCAACGCTAGAGCATTCTTTCGATCACACGGATGTAGTTCGAATGATAT
TCAAACAAAATACAACAGCCGCGCCGCTGTGCTGTACCGAGGAAAACTGAAAAGCATGAC
CGTGGAAGCTTTAAAGAAATATGATAATTCGGTTTTGCATATATCTTCGCAAAATTCGCC
TGCCGAAACGATATCATCGTCCTCGCAAGCCGAAGATGATTTCTTCTCAAAATACGGCGG
TGCTTCTATGAGCAAGAACCCATCTCTCGCCAGTAACCAGTCTCCGAAACTGGGTAGAAC
TACTGAAGGACTAAAGCATGTTTCTTCGTCGCCCGCTGTTATTTCGTTGAGTACTGATGA
CAAAGGTCAGCTTCAGTG

InterProScan

Gene3D
ArfGAP_dom_sf (IPR038508) - T[2-141] 1.5E-56
SMART
ArfGAP_dom (IPR001164) - T[9-125] 9.0E-44
SUPERFAMILY
ARFGAP/RecO (IPR037278) - T[9-113] 4.32E-37
ProSiteProfiles
ArfGAP_dom (IPR001164) - T[9-128] 25.945
Pfam
ArfGAP_dom (IPR001164) - T[11-110] 1.4E-32
PRINTS
ArfGAP_dom (IPR001164) - T[21-40] 2.0E-17 - T[40-57] 2.0E-17 - T[62-83] 2.0E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARFG1_HUMAN 46.957 % 116 5.56E-31
ARFG2_HUMAN 50.746 % 207 1.74E-64
ARFG3_HUMAN 50.754 % 203 4.83E-63