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- Transcript 'Boschl.CG.Botznik201...' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g24641.01.t
Possible name(s)
ACTB; ACTC1; ACTG1
Gene model
Location
chrUn [160,984,320 / 160,985,655]
Amino acid sequence
Length: 329
>Boschl.CG.Botznik2013.chrUn.g24641.01.p
MGQKDSYVGDEAQGKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPCLLT
EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY
EGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE
MTTAATSSCIEKSYELPDGQVITIGNERFRCPEAMLQPSFIGMESAGIHETTYNSIMKCD
VDIRKDLYANTVLSGGTTMFPGIADRMQKEIQALAPTTMKIKIIAPPERKYSVWIGGSIL
ASLSTFQQMWISKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 990
>Boschl.CG.Botznik2013.chrUn.g24641.01.t
CATGGGCCAGAAAGACAGCTATGTCGGAGACGAAGCTCAAGGCAAAAGAGGAATCTTGAC
CCTTAAATATCCAATCGAACACGGTATCGTTACAAACTGGGACGACATGGAGAAAATCTG
GCATCACACTTTCTACAACGAACTCCGTGTGGCCCCGGAGGAACACCCGTGTCTATTAAC
CGAAGCCCCTCTTAACCCTAAAGCTAACCGAGAAAAGATGACGCAAATCATGTTCGAAAC
TTTCAACGCCCCGGCTATGTACGTAGCTATCCAAGCCGTGCTGTCTCTGTACGCATCGGG
ACGTACTACAGGTATTGTCATGGATTCCGGCGACGGCGTCTCGCACACAGTACCGATTTA
CGAAGGTTACGCGCTGCCTCACGCAATCATCCGTCTTGACCTTGCCGGCCGAGACCTCAC
GGATTATCTCATGAAAATCCTAACCGAACGTGGTTATTCTTTCACGACGACAGCCGAACG
CGAAATTGTCCGCGACATCAAGGAGAAATTGTGTTACGTTGCTTTGGATTTCGAGCAAGA
AATGACGACCGCCGCCACGAGCAGCTGTATCGAAAAGAGCTACGAGCTTCCAGACGGTCA
AGTTATCACAATCGGCAACGAGCGATTCAGGTGTCCCGAAGCGATGCTTCAGCCGTCTTT
CATCGGCATGGAGAGCGCCGGTATTCACGAAACAACATACAATTCCATCATGAAATGCGA
CGTTGACATCCGTAAAGACTTGTACGCTAATACCGTTCTGTCCGGCGGTACTACTATGTT
CCCCGGCATCGCTGATCGCATGCAGAAAGAAATCCAGGCTCTCGCCCCGACGACCATGAA
AATCAAAATCATCGCCCCTCCGGAGAGGAAATACTCCGTATGGATCGGAGGCTCTATTCT
CGCGTCACTGTCAACATTCCAGCAAATGTGGATCTCTAAACAGGAATACGACGAATCCGG
GCCGTCGATTGTGCACAGGAAATGCTTCTA
| SMART |
Actin (IPR004000) - T[1-329] 5.3E-192 |
| PANTHER |
Actin (IPR004000) - T[3-328] 8.5E-235 |
| PRINTS |
Actin (IPR004000) - T[3-14] 1.3E-50 - T[15-37] 1.3E-50 - T[69-82] 1.3E-50 - T[94-113] 1.3E-50 - T[190-206] 1.3E-50 |
| Pfam |
Actin (IPR004000) - T[5-329] 6.6E-131 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[7-17] . - T[310-318] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[58-70] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 94.833 % | 661 | 0 |
| ACTB_HUMAN | 94.833 % | 660 | 0 |
| ACTC_HUMAN | 93.009 % | 652 | 0 |