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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g24642.01.t

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

Boschl.CG.Botznik2013.chrUn.g24642

Location

chrUn [160,988,788 / 160,991,040]

Sequences

Amino acid sequence

Length: 321

>Boschl.CG.Botznik2013.chrUn.g24642.01.p
MEDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMT
QIMFETFNTPAMYVNIQAVLSLYASGRTTAEREIVRDIKEKLCYVALDFEQEMTSAASSS
SMEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEHAGIHETTYNSILKCDIDIRKDLY
ANTVLSGGTTMYPGIADRMQKEIQALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
MWISKQEYDESGPAIVHRKCF

Nucleotide sequence

Length: 966

>Boschl.CG.Botznik2013.chrUn.g24642.01.t
TGGAAGATGAAGTTGCCGCACTCGTTGTAGATAATGGATCCGGAATGTGCAAAGCCGGTT
TCGCCGGTGATGATGCCCCGAGAGCTGTCTTCCCGTCCATTGTCGGACGACCGAGGCACC
AAGGTGTCATGGTCGGTATGGGCCAGAAGGACAGCTACGTAGGAGACGAAGCACAGAGCA
AGAGAGGTATTTTGACCCTGAGATACCCGATCGAACACGGTATCGTCACAAACTGGGATG
ACATGGAAAAGATCTGGCATCACACCTTCTACAACGAACTCCGTGTCGCTCCCGAAGAAC
ACCCTGTCCTTCTCACCGAAGCTCCAATGAATCCCAAAGCGAACAGGGAAAAGATGACCC
AAATCATGTTCGAAACCTTCAATACTCCCGCCATGTACGTTAACATCCAAGCCGTACTTT
CATTGTACGCTTCCGGAAGAACAACGGGCGAACGTGAAATTGTCCGAGACATCAAAGAGA
AACTGTGCTACGTCGCACTCGACTTCGAACAGGAGATGACCAGTGCCGCCAGCAGCAGCT
CAATGGAAAAGAGCTACGAGCTCCCGGACGGTCAAGTCATCACAATCGGAAACGAGCGTT
TCAGGTGCCCGGAGGCACTTTTCCAACCATCCTTCCTCGGCATGGAGCACGCTGGTATTC
ACGAGACGACCTACAACTCCATCTTGAAGTGCGACATCGACATCCGTAAAGACTTGTACG
CCAACACCGTCTTGTCGGGAGGTACCACTATGTACCCAGGCATCGCCGACCGTATGCAGA
AAGAAATTCAGGCGCTCGCTCCGAGCACCATGAAGATTAAAATCATTGCTCCTCCAGAGA
GGAAATACTCTGTATGGATCGGAGGCTCCATCCTCGCTTCACTCTCCACCTTCCAGCAGA
TGTGGATCTCAAAGCAAGAATACGACGAATCCGGCCCGGCCATTGTGCACAGGAAATGCT
TCTAAA

InterProScan

PANTHER
Actin (IPR004000) - T[1-149] 1.6E-223 - T[148-320] 1.6E-223
SMART
Actin (IPR004000) - T[5-321] 6.1E-178
PRINTS
Actin (IPR004000) - T[26-35] 2.3E-35 - T[49-60] 2.3E-35 - T[61-83] 2.3E-35 - T[115-128] 2.3E-35 - T[140-159] 2.3E-35
ProSitePatterns
Actin_CS (IPR004001) - T[53-63] . - T[302-310] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[104-116] .
Pfam
Actin (IPR004000) - T[148-321] 3.6E-70

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 81.333 % 622 0
ACTB_HUMAN 81.333 % 622 0
ACTA_HUMAN 78.877 % 603 0