Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g25283.01.t

Possible name(s)

DNAJB1; DNAJB4; DNAJB5

Gene model

Boschl.CG.Botznik2013.chrUn.g25283

Location

chrUn [165,202,686 / 165,203,869]

Sequences

Amino acid sequence

Length: 336

>Boschl.CG.Botznik2013.chrUn.g25283.01.p
MDYYEVLGISKNATEDQVKKAYRKLALKYHPDKNKSPDAEEKFKQIAEAYEVLSDEKKRR
SYDLHGFDGLNGGASESGDFGGGHNYTFTHNVDPRATFEAFFGGSNPFAKFDMFMEGEDS
DGPFGPDFRHFGGGNTKVFTTHNRSSPMGFSKTPQQDKAIMRELKVSLEDIAKGCTKRIK
ITRDKLNPDGRSTHREEKILSINIKKGWKEGTKITFPKEGDERPGVIPADIVFTLKDQPH
STFSRDGSNIIYHKSITLKEALTGCVLRIPTLEPGRTVTLHSSEVIKPDSTKVFADEGLP
FPKQPHKRGNLIVKYLIKFPDFLSSRQRTTLKETLP

Nucleotide sequence

Length: 1,011

>Boschl.CG.Botznik2013.chrUn.g25283.01.t
AATGGACTATTACGAAGTACTCGGAATCAGCAAGAATGCCACCGAAGACCAGGTCAAGAA
AGCTTACAGAAAGCTAGCTTTGAAATACCATCCTGACAAGAACAAGTCACCCGATGCCGA
AGAGAAATTCAAACAGATAGCCGAAGCGTACGAAGTATTAAGCGATGAAAAGAAACGCAG
GTCTTATGACCTACATGGATTCGATGGTCTCAACGGAGGGGCATCGGAAAGCGGCGATTT
TGGAGGCGGACACAATTACACTTTCACGCACAACGTTGACCCGCGAGCCACCTTCGAAGC
CTTTTTTGGCGGATCAAATCCTTTTGCGAAATTCGACATGTTCATGGAAGGAGAAGACAG
CGACGGTCCGTTCGGGCCTGATTTTAGACATTTCGGTGGAGGGAACACGAAAGTGTTCAC
CACCCACAATCGGTCCTCCCCGATGGGTTTCTCAAAAACACCGCAACAGGACAAAGCAAT
AATGCGTGAATTGAAGGTGTCTTTGGAAGATATTGCGAAGGGGTGTACCAAGAGAATAAA
AATTACGAGGGACAAGCTCAACCCGGATGGAAGATCCACTCACCGAGAGGAGAAGATTTT
ATCGATCAACATAAAGAAAGGTTGGAAGGAAGGTACGAAAATTACGTTTCCAAAAGAAGG
TGACGAAAGGCCTGGTGTGATACCCGCCGATATCGTATTCACTTTGAAAGATCAGCCACA
CTCGACATTCTCTCGAGACGGGAGCAATATAATCTACCACAAGTCCATCACGTTAAAAGA
GGCGTTAACGGGCTGTGTATTGCGGATACCGACGCTGGAACCGGGCCGCACGGTTACCCT
TCATTCTTCCGAAGTTATAAAGCCGGACTCGACGAAAGTTTTTGCTGACGAGGGACTGCC
GTTTCCTAAACAGCCGCACAAGCGGGGGAACCTCATCGTGAAATATCTCATCAAATTTCC
AGACTTTTTAAGCTCGCGGCAGCGCACGACGCTAAAAGAAACGCTACCTTG

InterProScan

Gene3D	J_dom_sf (IPR036869) - T[1-142] 9.0E-37
SMART	DnaJ_domain (IPR001623) - T[1-58] 1.1E-33
SUPERFAMILY	J_dom_sf (IPR036869) - T[1-104] 1.14E-32
Pfam	DnaJ_domain (IPR001623) - T[2-63] 2.2E-29
CDD	DnaJ_domain (IPR001623) - T[2-55] 1.40675E-28
ProSiteProfiles	DnaJ_domain (IPR001623) - T[2-66] 25.165
PRINTS	DnaJ_domain (IPR001623) - T[4-22] 2.2E-30 - T[22-37] 2.2E-30 - T[38-58] 2.2E-30 - T[58-77] 2.2E-30
ProSitePatterns	DnaJ_domain_CS (IPR018253) - T[43-62] .
SUPERFAMILY	HSP40/DnaJ_pept-bd (IPR008971) - T[160-240] 6.93E-16 - T[243-330] 2.88E-18
Pfam	DnaJ_C (IPR002939) - T[163-320] 1.2E-40

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DNJB4_HUMAN	52.507 %	319	1.85E-108
DNJB1_HUMAN	49.271 %	306	4.45E-103
DNJB5_HUMAN	52.722 %	331	4.9E-113