Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g26212.01.t

Possible name(s)

MTF2; PHF20; PHF20L1

Gene model

Boschl.CG.Botznik2013.chrUn.g26212

Location

chrUn [171,361,575 / 171,366,345]

Sequences

Amino acid sequence

Length: 389

>Boschl.CG.Botznik2013.chrUn.g26212.01.p
MDYIEQDLNLIRTASGDADEEDPSATKVKTASRTEKRSKKNVVGVQKAGRKKKTEANISE
KEEKQGRKEMSASSVLGKIKLPLQKKRLSKEALSNKLNMNPESQANKPKVQVTPKTASAR
SRNSIDPDAIPIEAIRFVEGAKIEAVDNGKWYKAKIVKVDEDKLDILVHFDGWGARFDTW
FPMTSALIRGRTQVEAKPETLTFEEGEDVLARWSDGNFYPATVLKVAKSGLHNVMFFDGL
KKSLRPTFLKKMSEKEKEEAMKAAQKLLMLPQEMVIQDSSESSSASPSSDGRRYRTSAND
RERRLSARTRDGEGTPITQRIAKRKSEAHATPATSKGDAVQKSSPKEEDFVAKKARLDTI
AVSLINRASPTSEMKDSSNEDSNTAINNK

Nucleotide sequence

Length: 1,168

>Boschl.CG.Botznik2013.chrUn.g26212.01.t
AATGGACTATATCGAGCAGGATCTGAATCTGATTAGAACTGCGTCAGGAGATGCAGACGA
GGAGGATCCGTCTGCAACAAAGGTTAAAACAGCTAGTCGTACTGAGAAAAGGAGTAAAAA
GAATGTGGTTGGTGTACAAAAAGCTGGAAGAAAAAAGAAGACTGAAGCAAACATTTCAGA
GAAGGAAGAGAAACAAGGCCGCAAAGAAATGAGTGCTTCCTCTGTCCTCGGAAAAATAAA
ACTGCCACTTCAAAAGAAGCGCCTGAGCAAAGAGGCATTGTCCAACAAACTGAACATGAA
CCCTGAATCACAAGCTAACAAACCGAAGGTGCAAGTCACGCCAAAAACGGCTTCCGCGCG
GAGTAGGAACAGCATTGATCCCGATGCCATTCCTATTGAAGCTATACGTTTTGTCGAGGG
TGCGAAAATCGAAGCTGTGGACAATGGGAAGTGGTACAAAGCTAAGATCGTCAAGGTTGA
TGAGGACAAATTGGATATTCTGGTGCATTTCGATGGATGGGGAGCTAGATTTGATACCTG
GTTTCCAATGACGAGTGCTCTAATCAGGGGCCGTACCCAAGTTGAGGCTAAGCCCGAAAC
CCTGACTTTTGAGGAAGGCGAGGATGTGCTTGCTCGGTGGAGTGACGGAAACTTTTATCC
AGCGACAGTATTGAAAGTCGCTAAGTCCGGGTTGCACAACGTCATGTTCTTTGACGGTCT
GAAGAAGTCGCTCCGGCCAACGTTTTTGAAGAAAATGTCGGAAAAAGAAAAGGAAGAAGC
GATGAAGGCCGCACAAAAATTGCTGATGCTTCCGCAAGAAATGGTGATTCAAGACTCGTC
CGAAAGCAGTTCAGCTTCTCCGTCGTCTGACGGCAGAAGATACCGCACATCAGCGAATGA
CCGGGAAAGAAGACTAAGTGCTCGTACTCGCGATGGTGAAGGTACACCTATCACGCAAAG
AATCGCCAAAAGAAAATCTGAGGCTCACGCGACTCCTGCAACTTCGAAAGGGGATGCAGT
TCAGAAGAGCTCGCCCAAAGAGGAGGATTTCGTCGCTAAAAAGGCGAGGCTGGACACCAT
AGCCGTGAGCTTGATAAATAGAGCATCCCCGACTTCCGAAAGGAAGGATAGTAGCAACGA
GGACTCTAACACGGCTATCAATAATAAA

InterProScan

PANTHER	PHF20 (IPR037915) - T[19-121] 3.8E-25 - T[135-349] 3.8E-25
SMART	Mbt (IPR004092) - T[105-204] 1.9E-5
SMART	Tudor (IPR002999) - T[135-190] 0.42 - T[201-257] 4.9E-9
SUPERFAMILY	Chromo-like_dom_sf (IPR016197) - T[135-194] 2.2E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
P20L1_HUMAN	36.364 %	94.7	6.4E-21
PHF20_HUMAN	37.5 %	94.7	7.26E-21