Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g27603.01.t

Possible name(s)

gBoschl.CG.Botznik2013.chrUn.g27603

Gene model

Boschl.CG.Botznik2013.chrUn.g27603

Location

chrUn [180,732,818 / 180,735,624]

Sequences

Amino acid sequence

Length: 280

>Boschl.CG.Botznik2013.chrUn.g27603.01.p
MRCDECARQLKRHKARELMKENKMKDAILILESMKSTRSKLVLLTECYLQVDQLPKAIEC
VMELKEMITSTPRPSVEEVEELVAQFMKAGYQVRAMSLIFCLSRLHCLDSQPDEAVVAIR
NCSSQIDDIIRPLTKSKSNQRFVDFAMFFMDDIIRDLRNVVKATPGIKSDMEARCLCDIG
LSSRASRQTDKALASFKLGIKVMTKQFGLNAIKFQIFGHLSNNIAIVYRMREQYGKAMIH
YEKSLEAYGKAQDWEGDFIKNKRLQSTRVNMALLKRKMNN

Nucleotide sequence

Length: 843

>Boschl.CG.Botznik2013.chrUn.g27603.01.t
TATGAGATGCGATGAATGCGCACGGCAACTGAAACGCCACAAAGCCCGGGAGCTGATGAA
AGAAAACAAAATGAAAGACGCCATTCTAATTCTGGAGTCCATGAAGAGCACTAGGAGCAA
ACTTGTCTTGCTGACGGAATGCTATCTGCAGGTCGATCAGCTGCCCAAGGCAATCGAATG
CGTCATGGAATTGAAAGAAATGATAACCTCTACGCCACGTCCGTCAGTGGAAGAGGTGGA
GGAACTGGTGGCTCAATTTATGAAAGCTGGCTATCAAGTGCGAGCGATGAGTCTGATTTT
CTGCCTTTCCCGGCTCCACTGCCTCGATTCCCAGCCCGACGAGGCTGTCGTCGCCATCCG
AAACTGTTCCAGCCAGATTGATGACATCATCAGGCCGCTGACTAAGTCTAAATCGAATCA
GAGATTCGTAGATTTCGCCATGTTTTTCATGGACGACATCATTCGCGATTTACGAAATGT
CGTGAAGGCCACGCCTGGAATCAAATCCGATATGGAAGCCCGGTGCTTGTGCGATATAGG
ACTAAGTAGCAGGGCCTCGAGACAGACAGACAAAGCTCTGGCCTCCTTTAAACTCGGCAT
CAAAGTAATGACGAAACAGTTTGGACTGAACGCCATAAAGTTTCAGATATTCGGCCACTT
GTCGAACAATATCGCGATAGTGTACAGAATGCGTGAGCAGTACGGGAAGGCTATGATACA
CTACGAAAAGTCTCTGGAAGCCTACGGAAAAGCTCAAGACTGGGAGGGTGACTTTATCAA
AAATAAAAGACTGCAAAGCACCAGAGTTAACATGGCGTTGCTCAAGCGTAAGATGAACAA
CTA

InterProScan

SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[46-72] 6.45E-8 - T[161-274] 6.45E-8
Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[144-280] 5.5E-9
SMART	TPR_repeat (IPR019734) - T[173-206] 55.0 - T[218-251] 3.4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value