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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S7...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g28680.01.t

Possible name(s)

USP20; USP33; USP4

Location

chrUn [187,870,949 / 187,876,000]

Sequences

Amino acid sequence

Length: 326

>Boschl.CG.Botznik2013.chrUn.g28680.01.p
KTGHPVAVNLQTFRCWCCICEIEIKLFNTDEIKALKEERKLFLSLHSSTAQVPWTMDVDC
ESNTRTSTLGLTGLENLGNTCYMNAALQALSNCSPLTYYFISEYAERNKSHKSGSMSLGY
FKMLTEFWNKNMYQRPPYLNPAAIHMSLKTINPSFRGYQQQDTQEFLRCFMDCLHEELKE
VVPRWTYEDDLGNGRGEEPASKNKNDIQDSETEDVSSGNAKEIDHAAESCPFIPPRVISE
LFDGGLRSSVQCLTCDQVSHTRETFQDLSLPIPGKDDLARLHTSAGFLFSGELAVNPGFN
GPCEETSGVKIPLLNYAWNVWEWVKG

Nucleotide sequence

Length: 981

>Boschl.CG.Botznik2013.chrUn.g28680.01.t
AAACAGGCCACCCTGTTGCGGTGAATTTACAGACGTTCCGGTGTTGGTGTTGTATATGCG
AAATTGAAATCAAGCTTTTTAATACTGATGAAATTGAAGCTTTGAAAGAAGAACGTAAAC
TTTTTTTATCTCTACATTCAAGCACTGCACAGGGGCCTTGGACAATGGACGTTGATTGTG
AAAGCAACACAAGGACCTCTACCCTTGGTTTGACCGGACTGGAAAACCTTGGGAATACGT
GTTATATGAACGCAGCGCTGCAGGCGCTTTCAAACTGGTCGCCGTTGACTTACTACTTCA
TATCTGAGTACGCGGAGCGGAACAAATCCCACAAAAGCGGTTCAATGTCACTAGGGTATT
TCAAGGTGCTGACAGAGTTCTGGAACAAAAATATGTACCAAAGACCGCCTTACCTCAACC
CTGCCGCGATACATATGTCTCTGAAAACGATCAACCCTTCTTTTAGAGGATATCAACAGC
AGGACACCCAAGAGTTTTTGCGTTGTTTCATGGATTGTCTGCACGAAGAGCTAAAGGAGG
TCGTGCCGAGGTGGACCTACGAAGATGATCTTGGCAACGGCAGGGGTGAAGAGCCGGCAA
GCAAGAACAAGAATGATATTCAAGATAGCGAAACGGAAGATGTATCAAGCGGAAATGCAA
AGGAGATTGATCATGCTGCGGAGTCATGTCCGTTCATACCTCCCCGGGTGATTTCCGAAT
TATTCGACGGAGGGCTGCGGTCGTCAGTTCAATGCTTGACGTGTGACCAGGTCTCGCACA
CAAGAGAAACATTCCAAGACTTGTCGTTGCCCATTCCTGGTAAAGACGATTTGGCGAGAC
TGCATACGTCAGCTGGGTTTTTGTTTTCCGGAGAGCTGGCCGTCAATCCGGGCTTCAACG
GCCCGTGCGAGGAGACCAGCGGTGTGAAGATACCCCTGCTCAACTACGCCTGGAACGTCT
GGGAATGGGTGAAAGGGTAAG

InterProScan

ProSiteProfiles
USP_dom (IPR028889) - T[72-326] 24.696
Pfam
Peptidase_C19_UCH (IPR001394) - T[72-220] 4.1E-25
ProSitePatterns
USP_CS (IPR018200) - T[73-88] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBP4_HUMAN 34.742 % 106 2.3E-25
UBP33_HUMAN 40.404 % 147 2.73E-39
UBP20_HUMAN 39.394 % 146 5.33E-39