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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g28735.01.t

Possible name(s)

PTPRC; PTPRE; PTPRF

Location

chrUn [188,266,968 / 188,269,026]

Sequences

Amino acid sequence

Length: 167

>Boschl.CG.Botznik2013.chrUn.g28735.01.p
MIKSSTDHPICTIDQRPLNVTDSNKKTTIFIICTGTLSYRFRHYNIEVCEFARDGIKRSG
IFIAVLNILARLQSENRIDVFRTVKDLRDIRPGMIPTQCPDLKGADLTMRVSHNPTPAHC
TPLSYTAFQRSPTVIRENAISDKSYREFKPICVIQGRTYFHDRIMLR

Nucleotide sequence

Length: 504

>Boschl.CG.Botznik2013.chrUn.g28735.01.t
TGATCAAATCAAGTACCGACCACCCTATATGTACAATTGATCAGCGACCCCTAAACGTCA
CCGACTCAAACAAAAAGACTACAATATTCATCATATGTACCGGTACTCTATCTTATCGTT
TTCGTCACTATAATATTGAGGTCTGCGAATTCGCGAGGGACGGTATAAAACGAAGTGGAA
TTTTCATCGCGGTTTTGAACATACTGGCAAGACTTCAGTCGGAGAATAGGATCGATGTAT
TTCGTACCGTTAAAGATCTCAGAGATATTCGACCCGGAATGATACCAACACAGGGTCCCG
ACTTGAAAGGGGCCGACCTCACGATGCGTGTGTCTCATAACCCCACACCGGCCCATTGTA
CACCCCTAAGCTACACAGCATTCCAACGGTCACCGACGGTGATTCGAGAGAATGCAATAT
CGGATAAATCTTATCGTGAATTCAAACCAATTTGTGTAATACAAGGACGGACATATTTTC
ACGATCGAATCATGTTGCGGTAAT

InterProScan

Gene3D
Prot-tyrosine_phosphatase-like (IPR029021) - T[3-99] 3.8E-11
ProSiteProfiles
PTPase_domain (IPR000242) - T[49-98] 8.501
Pfam
PTPase_domain (IPR000242) - T[52-97] 5.7E-8
SUPERFAMILY
Prot-tyrosine_phosphatase-like (IPR029021) - T[53-98] 3.54E-10
ProSiteProfiles
TYR_PHOSPHATASE_dom (IPR000387) - T[55-102] 9.662

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value