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TRANSCRIPT CARD

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  1. Clone 'ma216b19' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  4. Transcript 'KH2012:KH.C8.192.v2....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g28904.01.t

Possible name(s)

NPC1; PTCH1; PTCH2

Gene model

Boschl.CG.Botznik2013.chrUn.g28904

Location

chrUn [189,672,063 / 189,680,704]

Sequences

Amino acid sequence

Length: 418

>Boschl.CG.Botznik2013.chrUn.g28904.01.p
ILHRLFEDGLGRIVANVPFAIVAICITLGIAGLMAWGFYKLEVRYDPDWYIPLDSYVAVY
GDKYEQYYSFGAEASVYVLNADFYNERQKLNTLFQSLQRNSDLNSAYGSSWFAAYIAYED
TTNSIAVLNDTAYADATEFYTGVQTFLSSTSGRKYIYDVVFRNGVIVGSKFDVRHRSVQE
QVDNVDIIDSIRRNCEAAGFSSGASVFPFGNSYFIYEITRIISQEVYRNIGITMLCVLLM
VIPMLASLQMGCWVALCVAITTVDVAGTMYFAGLSIETSTIITLLLSIGLAVDYAAHIGH
KFLSIKGSRRMRARVAIGEIGLAVFNGGFSTFLALVMLSLSNTYTYRVFFTVFVCVVGYG
LWNGLVFLPCVLALIGPPPHANAVEARLSNKHYERKGKVDSRETSMDNIPSTISKRSV

Nucleotide sequence

Length: 1,257

>Boschl.CG.Botznik2013.chrUn.g28904.01.t
TACTTCATAGATTGTTTGAGGATGGCTTAGGTCGCATCGTCGCTAACGTTCCCTTCGCAA
TAGTAGCAATTTGCATTACTTTGGGAATAGCAGGACTTATGGCCTGGGGATTCTATAAAT
TAGAAGTTCGCTACGATCCTGATTGGTATATTCCGTTGGACAGGTACGTGGCAGTGTATG
GTGACAAATACGAACAGTACTACAGCTTTGGTGCGGAAGCCAGCGTCTACGTACTAAACG
CGGACTTTTACAACGAAAGGCAGAAATTGAATACTCTTTTCCAAAGCCTGCAACGCAATT
CGGACTTGAACTCGGCGTACGGCTCAAGGTGGTTTGCTGCCTATATTGCGTATGAAGATA
CTACTAATTCGATAGCTGTCTTGAATGATACCGCCTACGCGGATGCAACTGAATTTTACA
CGGGCGTACAGACGTTCTTGAGCTCTACATCTGGACGAAAGTATATTTACGACGTCGTGT
TTCGAAACGGCGTGATCGTAGGCTCCAAATTCGACGTACGCCATCGTTCCGTGCAAGAGC
AGGTCGACAATGTTGACATCATCGACAGCATTAGGAGGAATTGTGAAGCTGCCGGATTCA
GCAGTGGGGCAAGCGTGTTCCCTTTCGGAAAGTCTTACTTCATATACGAAATTACGCGTA
TAATCAGCCAAGAAGTCTACCGTAACATCGGCATAACTATGCTGTGCGTGCTTCTCATGG
TTATCCCGATGCTCGCAAGTTTGCAAATGGGATGCTGGGTGGCACTTTGTGTGGCTATAA
CTACTGTGGATGTAGCTGGGACAATGTACTTCGCAGGACTTTCAATAGAAACGAGTACCA
TCATTACGTTGCTGCTGTCGATCGGGTTAGCCGTAGATTACGCAGCGCATATCGGACACA
AATTTCTGTCGATCAAAGGCAGTCGACGGATGCGGGCCAGAGTGGCCATTGGAGAGATTG
GCTTGGCAGTCTTCAACGGGGGATTTAGCACCTTTTTGGCGCTTGTAATGCTGTCTTTGT
CCAACACGTATACATACAGGGTGTTTTTCACGGTGTTCGTTTGCGTCGTGGGCTACGGAC
TGTGGAACGGCCTAGTGTTCCTCCCGTGCGTCTTGGCTCTTATCGGACCACCCCCTCACG
CCAACGCTGTTGAAGCGCGTTTATCAAACAAGCACTATGAGAGGAAAGGAAAAGTCGACT
CGCGCGAAACGAGCATGGATAATATTCCTTCTACGATATCAAAACGATCAGTATAAT

InterProScan

Pfam
Ptc/Disp (IPR003392) - T[4-375] 6.9E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NPC1_HUMAN 22.658 % 99 4.72E-22
PTC2_HUMAN 29.717 % 85.9 8.62E-18