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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. EST 'BW407948' > 
  3. EST 'AHC0AAA229YE14_RM1' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g28962.01.t

Possible name(s)

CLTA; CLTB

Gene model

Boschl.CG.Botznik2013.chrUn.g28962

Location

chrUn [189,973,258 / 189,976,401]

Sequences

Amino acid sequence

Length: 188

>Boschl.CG.Botznik2013.chrUn.g28962.01.p
DLFNAPADDDNFFGGGGDETAADVIDEMDPSQAYAAIAAADARIQELKAEPPKIAQWREE
HNRMLQEKDIEEEKKKQEWLNHARKELEDWERNRLEQLEKTKENNRIANEEYQKALADDK
HGIGYTAAEKDFIAERDESRPGSEWERVSKLCDFNPKSSKGTKDVSRMRSTLLQLKQHNS
VKPTVAAK

Nucleotide sequence

Length: 569

>Boschl.CG.Botznik2013.chrUn.g28962.01.t
CGATTTATTCAACGCTCCCGCTGACGACGACAATTTTTTTGGTGGTGGCGGTGATGAAAC
TGCCGCTGATGTAATTGATGAGATGGACCCATCACAAGCATATGCTGCTATTGCTGCAGC
AGATGCTAGGATACAGGAGTTGAAGGCAGAACCACCGAAGATTGCACAGTGGCGAGAGGA
GCACAACCGAATGTTGCAAGAGAAAGGCATTGAAGAAGAAAAGAAAAAACAAGAATGGCT
CAACCACGCTAGGAAGGAGCTCGAGGACTGGGAGAGAAACAGGCTTGAACAGCTGGAAAA
GACAAAAGAAAATAATAGGATTGCCAATGAAGAATATCAAAAGGCATTAGCTGATGACAA
GCACGGAATTGGATACACGGCGGCAGAAAAAGATTTCATTGCCGAGAGAGACGAAAGCAG
GCCGGGATCTGAATGGGAACGGGTGTCTAAGTTGTGCGATTTCAACCCGAAAAGTAGCAA
GGGAACGAAAGATGTATCGCGGATGCGATCCACCTTGTTGCAGTTGAAGCAACATAATTC
CGTGAAACCAACCGTTGCGGCAAAGTAGT

InterProScan

Pfam
Clathrin_L-chain (IPR000996) - T[21-179] 8.3E-42
PANTHER
Clathrin_L-chain (IPR000996) - T[23-179] 5.4E-46

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLCB_HUMAN 48.045 % 144 2.56E-43
CLCA_HUMAN 48.447 % 133 4.91E-39