- Transcript 'KH2012:KH.C6.158.v2....' >
- Transcript 'KH2012:KH.C6.158.v1....' >
- EST 'FF792092.1' >
- EST 'AHC0AAA223YI04_RM1' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g28979.02.t
Possible name(s)
KIRREL1; KIRREL3; NPHS1
Gene model
Location
chrUn [190,082,214 / 190,090,421]
Amino acid sequence
Length: 893
>Boschl.CG.Botznik2013.chrUn.g28979.02.p
MKPLQWALLRGIFLLIVLTVSLCYGQAHYFLRQPAIETVVRLGDVTTLQCAVANMVTSVQ
WVVNGFAMGPLRDGRYRYAGNKSNGEYNLQINNTQLIDDGIYDCQVLKPKDGKPLRSRFA
NLTVLVPPKQILMTPVTRGLINAKYPGTVTVSCGVPDTKPAAQIQWRVDGQVFSDVSNAK
MSAGSEPKLLSTVSSIALSTAKHHDGSLIECIVDHLALDEPVIRRAVLNVLQPPSQPVIS
GFRPGPMRSGDDLTVQCTSAGGNPAASISWSIGEKILEGEYQILDDGARNTLRHTLTPED
NGKLLKCTVTSPAISTPLQTHLRLEVHYPPESIGIEQTPKDGVGEGEEITFICYHTKSNP
LATLEXATVASLQQMIDDPYTLTVEYAPTFRREQTFSYNITENSKLSEINVLVDANPSIV
SFAWFRYLSSDTGSTRLVKVPLVSDSKLAWEKESGVLRIRDVERSDEGVYTVSASNGIGR
MGPLRDGRYRYAGNKSNGEYNLQINNTQLIDDGIYDCQVLKPKDGKPLRSRFANLTVLVP
PKQILMTPVTRGLINAKYPGTVTVSCGVPDTKPAAQIQWRVDGQVFSDVSNAKMSAGSEP
KLLSTVSSIALSTAKHHDGSLIECIVDHLALDEPVIRRAVLNVLQPPSQPVISGFRPGPM
RSGDDLTVQCTSAGGNPAASISWSIGEKILEGEYQILDDGARNTLRHTLTPEDNGKLLKC
TVTSPAISTPLQTHLRLEVHYPPESIGIEQTPKDGVGEGEEITFICYHTKSNPLATLEXA
TVASLQQMIDDPYTLTVEYAPTFRREQTFSYNITENSKLSEINVLVDANPSIVSFAWFRY
LSSDTGSTRLVKVPLVSDSKLAWEKESGVLRIRDVERSDEGVYTVSASNGIGR
Nucleotide sequence
Length: 1,240
>Boschl.CG.Botznik2013.chrUn.g28979.02.t
CATGGGACCTCTACGCGACGGAAGGTATCGATATGCGGGAAATAAGTCGAACGGCGAATA
TAATCTGCAAATAAACAACACTCAGCTCATCGACGATGGGATTTACGACTGTCAGGTGTT
GAAGCCTAAGGACGGAAAACCTCTGCGATCGCGATTCGCCAATCTTACCGTACTAGTTCC
TCCCAAACAAATACTAATGACACCAGTCACGCGCGGTTTAATCAATGCGAAATACCCGGG
TACTGTGACGGTAAGTTGTGGTGTGCCAGACACGAAACCTGCTGCCCAAATTCAGTGGAG
AGTGGATGGCCAGGTTTTTTCTGACGTCAGTAACGCGAAAATGTCAGCCGGCAGTGAGCC
CAAGTTGCTGAGCACGGTTAGCAGTATCGCATTATCTACTGCGAAACATCACGATGGCTC
CTTAATCGAATGCATTGTGGATCATCTGGCGTTGGACGAGCCTGTGATAAGGAGAGCGGT
TTTGAACGTACTGGAACCTCCGAGCCAGCCGGTTATCTCCGGATTCCGACCAGGACCGAT
GCGATCCGGCGACGATTTGACGGTACAATGCACTTCGGCTGGCGGCAATCCAGCAGCGTC
CATCTCCTGGTCGATGGGCGAAAAGATTCTGGAGGGTGAATACCAAATATTGGACGACGG
TGCACGGAATACTTTGCGGCACACGCTGACGCCTGAGGACAACGGGAAGCTTTTGAAGTG
TACCGTTACAAGTCCTGCAATTTCGACCCCACTACAAACACACTTGCGACTGGAAGTTCA
CGATCCCCCAGAAAGCATCGGCATAGAACAAACCCCGAAAGACGGAGTGGGAGAAGGCGA
AGAGATTACCTTCATCTGCTACCACACCAAAAGCAACCCATTGGCCACGTTGGAGTGAGC
TACGGTTGCATCTTTGCAACAAATGATAGACGATCCGTACACTCTCACCGTGGAATACGC
CCCAACTTTTCGACGCGAGCAGACGTTTTCATACAATATCACCGAAAATTCAAAACTCTC
GGAAATCAACGTTCTAGTGGACGCTAATCCAAGCATAGTATCGTTCGCATGGTTTCGATA
TTTATCTTCCGACACCGGGTCTACGAGACTCGTGAAAGTGCCTTTGGTGTCGGACAGTAA
ACTCGCATGGGAGAAGGAAAGTGGCGTGCTCCGCATTCGTGATGTGGAGAGGTCCGACGA
AGGCGTCTATACCGTATCAGCGAGCAACGGCATTGGGAGA
| Gene3D |
Ig-like_fold (IPR013783) - T[26-131] 1.7E-19 - T[140-235] 2.2E-11 - T[236-332] 6.0E-17 - T[382-481] 1.5E-7 - T[482-544] 8.3E-12 - T[553-648] 2.2E-11 - T[649-745] 6.0E-17 - T[795-893] 2.3E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[31-131] 1.01E-12 - T[128-234] 5.8E-10 - T[233-330] 2.63E-15 - T[379-481] 2.51E-7 - T[482-544] 4.87E-7 - T[541-647] 5.8E-10 - T[646-743] 2.63E-15 - T[792-892] 5.25E-7 |
| Pfam |
Ig_I-set (IPR013098) - T[33-108] 3.7E-7 |
| SMART |
Ig_sub (IPR003599) - T[35-125] 3.8E-7 - T[242-327] 38.0 - T[338-538] 0.14 - T[655-740] 38.0 - T[751-893] 180.0 |
| SMART |
Ig_sub2 (IPR003598) - T[41-111] 0.21 - T[248-314] 0.55 - T[661-727] 0.55 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[43-123] 9.21 - T[128-229] 8.901 - T[233-319] 7.885 - T[388-477] 6.724 - T[541-642] 8.901 - T[646-732] 7.885 - T[801-893] 7.577 |
| Pfam |
CD80_C2-set (IPR013162) - T[148-219] 3.9E-7 - T[252-315] 4.7E-5 - T[561-632] 3.9E-7 - T[665-728] 4.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KIRR1_HUMAN | 26.593 % | 96.3 | 2.41E-20 |
| KIRR3_HUMAN | 27.129 % | 102 | 2.12E-22 |
| NPHN_HUMAN | 25.917 % | 153 | 5.51E-38 |