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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g29171.01.t

Possible name(s)

NR1H2; NR1H3; NR1H4

Gene model

Boschl.CG.Botznik2013.chrUn.g29171

Location

chrUn [191,500,502 / 191,502,513]

Sequences

Amino acid sequence

Length: 115

>Boschl.CG.Botznik2013.chrUn.g29171.01.p
VEPRKFEALLDFFNSIGKLGMDEIEYGLLIAIVIFNSDYDFVKNKEIIDEYQDLYLSALA
KYSMARTPTRTSIFPRILAMLTEIRSLSHNNAEIVSSWKRRGALTPLLCEIWDLE

Nucleotide sequence

Length: 350

>Boschl.CG.Botznik2013.chrUn.g29171.01.t
CGTTGAACCGAGAAAGTTTGAAGCTTTGCTCGACTTTTTCAATTCTATTGGTAAGCTTGG
GATGGATGAAATAGAGTACGGCTTGCTCATCGCAATTGTCATCTTCAATTCCGGTTATGA
TTTCGTGAAAAACAAAGAGATCATCGACGAATACCAAGACCTGTACTTAAGTGCGCTGGC
GAAGTACAGCATGGCTAGAACTCCGACGCGGACGTCGATATTTCCCCGAATATTAGCCAT
GTTGACAGAGATCAGATCCCTCAGTCATAACAACGCAGAAATCGTCTCTTCGTGGAAAAG
GCGAGGCGCCTTGACACCCCTACTCTGCGAAATATGGGATTTGGAATAAG

InterProScan

SUPERFAMILY
NHR_like_dom_sf (IPR035500) - T[6-113] 1.31E-27
Pfam
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[8-94] 5.9E-11
PRINTS
Nuclear_hrmn_rcpt (IPR001723) - T[19-34] 4.6E-7 - T[76-93] 4.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NR1H4_HUMAN 38.889 % 90.1 2.32E-22





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