Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g30534.01.t

Possible name(s)

LRP1; SRPX; SVEP1

Gene model

Boschl.CG.Botznik2013.chrUn.g30534

Location

chrUn [199,921,000 / 199,922,339]

Sequences

Amino acid sequence

Length: 279

>Boschl.CG.Botznik2013.chrUn.g30534.01.p
MRSRYDGSEKETVFDNLNWPHAITIDYQSDRLYVVESMEGMIFGVDLSSLMNITSTEIYG
ASGWRQFDVSAGLSSSGNITDLKVQSDIGFVVDSKNKKLFRINFTEGEDSLKAFGPDQFF
RIAALTLVSQNFYSTYTKPKTNPCEKSECRQMCAVLSENSSVCICEDGKIPAYNACIEDE
DLPDDADTLPPEPLNCPENSEVSLPTCSDSVIYSWTEPSWRDDTTASDNLTLSSNLSPPS
NLRAGQSEITYRARDESGNIGYCRFTVTVRGTTSRGLDY

Nucleotide sequence

Length: 839

>Boschl.CG.Botznik2013.chrUn.g30534.01.t
TGCGGTCTCGATACGACGGATCCGAGAAAGAAACGGTGTTCGACAACCTAAACTGGCCTC
ACGCCATCACGATCGATTACCAAAGCGATCGACTGTACGTGGTCGAGTCGATGGAAGGGA
TGATTTTCGGAGTCGATTTGTCGTCGTTGATGAATATCACTAGCACGGAAATCTACGGCG
CGTCCGGCTGGCGACAGTTCGATGTTTCGGCCGGATTGTCGAGTAGCGGAAACATAACGG
AGCTGAAAGTTCAAAGCGATATCGGGTTCGTGGTCGACAGTAAAAACAAGAAGTTGTTTC
GAATTAACTTCACCGAGGGCGAGGACTCGTTAAAAGCGTTCGGACCGGATCAGTTTTTCA
GGATCGCTGCTTTGACGCTCGTGAGCCAAAACTTCTACTCGACATACACGAGACCAAAGA
CGAACCCTTGCGAGAAGTCAGAATGTCGGCAAATGTGCGCGGTTCTGAGCGAGAACTCGA
GCGTTTGTATTTGTGAAGACGGAAAGATTCCTGCCTACAACGCCTGCATCGAAGATGAAG
ATTTGCCGGATGATGCGGGCACTCTCCCTCCCGAACCTCTAAACTGTCCGGAAAACTCCG
AGGTCTCTCTCCCGACTTGCTCGGACTCCGTGATCTACTCATGGACTGAACCTTCCTGGC
GCGACGATACAACAGGATCTGACAATCTGACCCTGAGTTCGAATTTGAGCCCTCCTTCAA
ACCTAAGGGCCGGCCAGTCAGAAATAACGTACCGCGCTCGGGACGAGTCGGGAAACATCG
GATACTGTAGATTCACAGTAACAGTAAGAGGTACGACGTCACGAGGCTTAGATTACTTA

InterProScan

Gene3D	6-blade_b-propeller_TolB-like (IPR011042) - T[1-180] 2.4E-18
ProSiteProfiles	HYR_dom (IPR003410) - T[186-271] 20.805
Pfam	HYR_dom (IPR003410) - T[187-269] 1.7E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value