- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g30640.01.t
Possible name(s)
COL7A1; NOTCH4
Gene model
Location
chrUn [200,565,174 / 200,571,073]
Amino acid sequence
Length: 279
>Boschl.CG.Botznik2013.chrUn.g30640.01.p
PADVSNVSVRAVTESTFQVLWSTAAEPNVSYNVSLLRFANGQTESEYEDASSGQDFAGAE
PGIKYRVSVTARNPSGYSHATTWSEMFAAELATPQVRTESVSKNTILILWDEVPGASEYR
YECSNKLGVEMKTTDTKTTDTKTTDTQASIASLQPSTTYDCSVTAYSEELVESDRGEISV
TTICFNGGTCVEREESYECVCTPPYAPPDCSTADGRSKATAVCKFTDAGVAEFVDLTFVS
CDKTILGTIIIVSVQSACFQQNVKSRRFAGGGSTGNNFG
Nucleotide sequence
Length: 842
>Boschl.CG.Botznik2013.chrUn.g30640.01.t
GTACCTGCCGACGTCAGTAATGTATCCGTTCGGGCCGTGACCGAGAGCACGTTCCAGGTA
CTCTGGTCCACTGCGGCTGAACCGAACGTCTCGTACAATGTCAGTCTGCTGCGATTCGCG
AATGGCCAGACGGAGAGTGAGTATGAGGACGCATCATCCGGACAAGACTTTGCTGGCGCC
GAACCCGGTATAAAATACAGAGTGTCAGTTACGGCGCGAAATCCTTCAGGATACAGTCAC
GCCACGACTTGGAGCGAGATGTTTGCAGCGGAGTTGGCAACACCGCAAGTGCGTACAGAG
TCGGTTTCGAAGAATACAATTCTTATTCTCTGGGATGAAGTGCCGGGAGCGTCCGAATAT
CGGTATGAATGCAGCAATAAACTCGGTGTCGAGATGAAGACGACCGACACGAAGACGACC
GACACGAAGACGACCGACACTCAAGCTTCCATCGCCAGTCTGCAACCTAGCACCACATAT
GACTGCTCTGTCACCGCCTACTCGGAAGAACTCGTGGAAAGCGACCGCGGAGAGATATCT
GTCACGACAGTATGCTTCAACGGCGGCACTTGCGTGGAACGAGAAGAAAGTTACGAATGC
GTGTGCACACCTCCGTACGCCCCGCCAGACTGCAGTACAGCCGATGGCCGCTCCAAAGCT
ACAGCTGTGTGCAAATTCACCGATGCGGGGGTCGCAGAGTTTGTGGATTTAACCTTCGTG
TCTTGCGACAAAACTATCCTCGGGACCATCATAATCGTAAGCGTCCAGAGCGCATGTTTT
CAGCAGAATGTAAAGTCACGTCGCTTTGCAGGCGGAGGATCGACAGGAAACAACTTCGGA
TG
| SMART |
FN3_dom (IPR003961) - T[1-78] 2.7E-4 - T[90-173] 0.0018 |
| Gene3D |
Ig-like_fold (IPR013783) - T[1-89] 4.1E-7 - T[92-182] 3.0E-10 |
| CDD |
FN3_dom (IPR003961) - T[1-85] 3.23814E-5 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[3-91] 11.543 - T[92-186] 10.099 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[3-170] 7.0E-13 |
| Pfam |
FN3_dom (IPR003961) - T[4-79] 1.1E-5 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[174-211] 13.042 |
| Pfam |
EGF-like_dom (IPR000742) - T[182-206] 5.0E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[199-210] . |
| Protein Name | Identity | Bit Score | e-value |
|---|