Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g30824.01.t

Possible name(s)

G2E3; PHF6; PHF7

Gene model

Boschl.CG.Botznik2013.chrUn.g30824

Location

chrUn [201,826,367 / 201,827,612]

Sequences

Amino acid sequence

Length: 414

>Boschl.CG.Botznik2013.chrUn.g30824.01.p
MPRKRVKTEAYNILWNLFKAHGLSTPRVPTSIKAHLATFGDSIDNCLFCGANDDNVEKYG
QFIHAKCGISIHYFCLLFACDLTQSEDEKKCDIIDSSDAIYGFSIKDILMEFLRARRLQC
GYCYKKGASVGCAHSNCTKKFHYPCGLARKYLYQYCGVYGAHCVRHRPVQVLTKSPDSSH
STCGICFDTIDEPFDPFDVLTTPCCNNLWIHRKCVQKHALSFGSYLFRCPFCNNCDDFVT
EMQRMGVYIPQRDASWETPGAFDDLTESRLICDIEKCRCVHGRDYNQPDTIWSISTCVLC
NSSSAHVCCANLKSLSSPFVCDICKSVWAENLKAKLKDMGFTLRDTPIKRPISLINVCVE
ALDVSSLLELDEDDNTTNTSTDCGNGDTKTVTRTLRPRIRRIPYPKRRRIAFTV

Nucleotide sequence

Length: 1,245

>Boschl.CG.Botznik2013.chrUn.g30824.01.t
CATGCCAAGAAAACGCGTCAAAACCGAGGCCTACAACATTTTATGGAATCTTTTTAAAGC
TCATGGATTAAGCACACCTCGCGTGCCGACTTCTATTAAAGCTCATTTGGCAACATTCGG
CGATTCAATAGATAATTGCTTGTTTTGTGGAGCAAATGATGATAATGTCGAAAAATATGG
GCAATTCATCCACGCCAAGTGCGGTATATCAATCCATTACTTCTGTCTTCTGTTCGCCTG
CGATTTGACCCAAAGCGAAGATGAGAAAAAGTGTGATATCATAGATTCATCCGATGCTAT
ATATGGATTTTCGATAAAAGATATTCTGATGGAATTTTTGCGAGCCAGGCGGCTACAATG
CGGGTATTGTTACAAAAAAGGAGCAAGCGTTGGATGCGCTCATTCGAACTGCACGAAGAA
ATTTCACTATCCTTGCGGATTGGCGAGGAAATATTTGTATCAATACTGCGGCGTATATGG
AGCGCACTGCGTCCGTCATAGACCTGTGCAAGTCCTCACGAAATCTCCGGACAGTAGCCA
TTCAACTTGTGGAATTTGCTTCGACACGATCGACGAGCCTTTCGATCCGTTTGATGTGTT
GACCACGCCTTGTTGTAATAATTTATGGATCCATCGGAAATGCGTGCAGAAACACGCCTT
GTCGTTTGGATCGTATCTTTTCCGATGCCCGTTTTGTAACAATTGTGATGATTTTGTCAC
GGAAATGCAGCGCATGGGAGTGTATATTCCGCAAAGAGATGCGTCGTGGGAGACTCCGGG
TGCTTTTGATGATTTAACGGAATCGAGGCTTATATGTGACATAGAAAAGTGTAGATGTGT
ACACGGTCGCGATTATAATCAACCAGACACGATTTGGTCTATATCTACGTGCGTACTTTG
CAATTCGTCGAGTGCGCACGTCTGCTGCGCTAATTTGAAGTCGTTGAGCTCTCCGTTTGT
GTGTGATATTTGTAAGTCAGTTTGGGCCGAAAATCTAAAGGCGAAGTTGAAAGATATGGG
ATTCACGCTGAGAGACACCCCTATCAAACGTCCGATCTCTCTCATTAACGTATGTGTCGA
AGCGTTAGATGTCTCGAGTCTGCTGGAATTGGATGAAGATGATAATACCACTAATACCAG
TACTGATTGTGGCAATGGTGACACTAAAACTGTTACTAGGACTCTGCGTCCACGTATCAG
GCGGATACCATACCCTAAAAGAAGAAGAATAGCCTTCACTGTGTG

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[41-169] 7.8E-20 - T[250-332] 5.7E-17
ProSiteProfiles	EPHD (IPR034732) - T[43-167] 19.174
ProSiteProfiles	Znf_RING (IPR001841) - T[183-233] 9.494
SUPERFAMILY	Znf_FYVE_PHD (IPR011011) - T[250-330] 9.49E-19

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
G2E3_HUMAN	40.206 %	242	2.58E-73
PHF7_HUMAN	36.14 %	184	3.65E-54