- Transcript 'KH2012:KH.C14.207.v1...' >
- Transcript 'Cisavi.CG.ENS81.R23....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g31471.01.t
Possible name(s)
FSHR; LDLRAD3; SORL1
Gene model
Location
chrUn [205,782,227 / 205,790,884]
Amino acid sequence
Length: 470
>Boschl.CG.Botznik2013.chrUn.g31471.01.p
MRNWRTGYLSSGSHGNQPSKHLTFAEERLPARTQQWWKSAGILHSKLEICYLVQKSKCNL
DRRDAHCRAVSATACDGIGQCPPPQLHGWDVWTAESFPEDECNATCTFNPSPFRCEIAPS
RHYKTKLSGTWCIIPDDIERPNAYTREIVGWKYCDGVIDCELSGSDEDECEERFHCNATK
AGYVSIRKDQVCDGLIDCVDGKDENAGRCSGENSLGRFLCPALGGNMVSIDASFQCDSII
NCDDARDEKGCDDGRFYCENGEGPIFVSKNQFKYLVYATQVKDGKADCSDWSDECPTVDG
SNGQDAFSSRDEMIENPWLRVMVWIMGLLAIVGNLIVIVHESKKLRFPGRKTTPAIRANR
ILILNLACSDFLMGVYLVLLGSIAVQMKRDFGDDDGDSDGMQALRDSAAFSIIRSAFHAK
RDVFGGCGVGNVTDARFTPVIIKSDAFVHCWSGFCIQPVRYWDGGFVEQR
Nucleotide sequence
Length: 1,413
>Boschl.CG.Botznik2013.chrUn.g31471.01.t
TGCGCAACTGGCGCACCGGATATCTGTCGTCAGGTAGTCACGGAAATCAACCAAGTAAGC
GTTTGACATTTGCAGAGGAACGATTGCCTGCAAGGACTCAACAGTGGTGGAAGAGTGCAG
GTATATTACACAGCAAACTGGAAATTTGCTACCTAGTGCAGAAGTCGAAGTGCAACTTGG
ACAGGCGCGATGCACATTGTCGCGCCGTATCTGCCACAGCTTGTGACGGAATAGGGCAAT
GTCCGCCGCCTCAATTGCACGGATGGGACGTGTGGACCGCGGAGAGCTTTCCAGAAGACG
AATGCAACGCGACCTGCACTTTCAACCCGAGTCCTTTTCGATGTGAAATTGCGCCGTCCA
GACATTACAAGACCAAACTGTCTGGAACCTGGTGTATCATTCCTGACGATATCGAGAGGC
CGAACGCGTACACGCGAGAAATCGTAGGATGGAAGTATTGCGACGGCGTAATCGACTGCG
AATTGTCCGGGAGTGACGAAGATGAATGCGAAGAAAGGTTTCATTGCAACGCGACAAAAG
CAGGATATGTCAGCATCCGCAAGGATCAAGTCTGCGACGGCCTGATCGACTGCGTCGACG
GTAAGGACGAAAACGCGGGGAGGTGCAGCGGAGAAAACAGCCTCGGAAGATTCTTGTGCC
CGGCTCTTGGCGGCAACATGGTGAGCATCGACGCCTCATTCCAGTGCGACTCCATCATAA
ATTGCGATGACGCTCGCGATGAGAAGGGTTGCGACGACGGGCGGTTTTACTGCGAGAACG
GCGAAGGACCAATATTCGTTTCGAAGAATCAGGTTAAATATCTTGTTTATGCGACGCAGG
TCAAGGACGGCAAGGCGGACTGCAGTGATTGGAGCGATGAGTGTCCTACCGTGGACGGGT
CTAACGGACAAGACGCGTTTTCCTCGCGTGACGAAATGATTGAAAATCCATGGCTGCGTG
TAATGGTTTGGATTATGGGATTGCTCGCGATTGTCGGTAACTTGGTTGTCATCGTGCACG
AATCCAAAAAATTACGGTTTCCCGGAAGAAAGACAACTCCCGCGATCAGAGCCAACAGAA
TACTCATCTTGAATCTCGCGTGCTCAGACTTCCTCATGGGGGTCTACCTCGTGTTGCTCG
GAAGCATCGCCGTGCAAATGAAGGGAGACTTCGGTGATGACGATGGTGATTCTGACGGGA
TGCAGGCTCTACGCGATAGTGCGGGCTTTTCGATCATCCGCAGTGCCTTCCATGCGAAAC
GTGATGTGTTTGGTGGGTGTGGCGTGGGCAACGTCACTGACGCTCGCTTTACTCCCGTTA
TCATCAAGTCTGACGCATTTGTTCATTGCTGGAGTGGATTTTGTATTCAACCCGTTCGTT
ACTGGGACGGAGGTTTCGTTGAACAGCGCTAAA
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[145-166] 6.0E-10 - T[183-204] 6.0E-10 - T[227-248] 6.0E-10 - T[273-294] 6.0E-10 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[169-211] 0.014 - T[212-253] 0.086 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[169-210] 9.325 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[190-391] 1.1E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|