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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g31815.01.t

Possible name(s)

DDX58; DICER1; IFIH1

Gene model

Boschl.CG.Botznik2013.chrUn.g31815

Location

chrUn [208,052,580 / 208,059,328]

Sequences

Amino acid sequence

Length: 255

>Boschl.CG.Botznik2013.chrUn.g31815.01.p
MIKSVNKIGNRVVLVFAHEADIFSLGIIFYFTLSGGKHPFGNDSLKLDENIRDNVPDLVE
LKPECTFSKTLDDSDDILALDSEDDVPSEGEVLDIVPRKYQLELAEQAKQGHNSLIIAPT
GSGKTVVAYEIIRHHLMQSHAKSILFFVSKTTLALQQHRFFELCLKTLDKGEIGYIIGEN
STHAPTGAVLKGRRLVILTPQILIDELKRSRTSVKFSDFSLLIFDECHNATKKHPYKQVM
DLFLDSRTNDSGNAQ

Nucleotide sequence

Length: 765

>Boschl.CG.Botznik2013.chrUn.g31815.01.t
CATGATAAAATCGGTGAATAAGATCGGGAATCGCGTGGTTCTCGTCTTTGCCCAGGAGGC
TGATATCTTTTCATTGGGAATCATTTTCTATTTCACGCTCAGTGGTGGCAAACATCCATT
TGGTAATGATTCTCTGAAACTAGATGAAAACATCAGAGACAATGTTCCTGACCTGGTCGA
GTTGAAACCTGAAGGCACCTTCTCCAAAACACTGGATGACAGTGACGATATCCTTGCTTT
GGATTCAGAGGATGACGTTCCGTCTGAAGGCGAAGTTCTGGATATTGTACCGAGAAAATA
CCAGTTGGAGTTGGCTGAACAGGCAAAGCAAGGTCATAATTCCTTGATCATTGCTCCAAC
AGGCTCTGGTAAGACGGTGGTTGCATATGAGATAATCAGACACCATCTGATGCAAAGCCA
TGCTAAATCTATACTGTTTTTCGTATCCAAAACAACACTGGCATTGCAACAGCATCGATT
TTTTGAGCGCTGTTTGAAGACACTTGATAAGGGTGAAATTGGATATATCATCGGCGAAAA
CTCGACACATGCACCAACAGGGGCTGTCCTCAAAGGACGAAGACTAGTTATCCTCACGCC
ACAAATTTTGATTGATGAATTGAAAAGAAGTCGGACATCAGTCAAGTTCAGTGATTTTTC
TCTACTTATCTTTGATGAATGTCACAATGCAACCAAGAAGCATCCTTATAAGCAAGTAAT
GGATTTATTTCTGGATAGTCGGACGAACGACAGTGGAAATGCGCA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[24-243] 2.26E-31
SMART
Helicase_ATP-bd (IPR014001) - T[93-255] 4.3E-10
Pfam
Helicase/UvrB_N (IPR006935) - T[98-243] 2.8E-18
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[105-255] 16.212

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DDX58_HUMAN 39.264 % 112 3.67E-28