- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'Boleac.CG.SB_v3.S523...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g31821.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
chrUn [208,111,043 / 208,112,299]
Amino acid sequence
Length: 376
>Boschl.CG.Botznik2013.chrUn.g31821.01.p
MSTLVTGGYTMPERLHKDFSANLFGQDTSGFSLQALLGMNDNFSPLTNQSMAGIRPMQRP
MNTVRRNSTSSVTSNPSARNRMNMNSLTTMPNTIPETSTATLSAAISSIQTDFRGRAYSE
GASSLSSDSSVQQQQPVASSRYKTELCRPFEENGKCKYGDKCQFAHGKHELRHLARHPKY
KTELCRTFHTSGFCPYGPRCHFIHNQDDSTQRNMGMQMPASGMSQQKPCTHGVPIAVPTP
HVSERNHYNHRPAQLNLLAKQLSNGPNFGSNMGFNGMPPSPPYMDMGNSAVMSPTSPVSG
NNGSAFSFNTAALAGIIMPTDSTFEVLRSQGHFETTVNDDSPFDSLPTPPDSDRESMTGS
PPEKQRLPIFRCLSQS
Nucleotide sequence
Length: 1,131
>Boschl.CG.Botznik2013.chrUn.g31821.01.t
TGTCGACATTAGTAACAGGAGGGTATACAATGCCTGAACGACTTCACAAAGATTTTTCGG
CCAACTTGTTTGGACAAGACACGAGCGGTTTTAGCCTTCAAGCTTTACTCGGGATGAACG
ACAACTTTTCGCCGCTGACGAACCAATCGATGGCCGGCATCAGGCCTATGCAAAGGCCGA
TGAATACCGTGCGACGAAACTCTACTTCTTCAGTAACTTCAAACCCCTCAGCCCGAAATC
GTATGAACATGAACTCGCTAACGACTATGCCCAACACGATTCCAGAAACATCCACTGCAA
CCTTGTCAGCTGCTATAAGTTCAATCCAAACGGATTTTCGCGGAAGAGCCTACAGCGAAG
GGGCTAGTTCGTTAAGCTCTGATTCTTCTGTGCAACAACAACAGCCTGTGGCTTCAAGCA
GGTACAAAACTGAATTATGTAGGCCGTTTGAAGAAAATGGAAAGTGCAAATACGGGGATA
AGTGTCAGTTCGCTCACGGGAAACACGAATTGCGGCATCTGGCGAGACACCCGAAGTACA
AAACCGAGCTCTGCAGGACTTTTCACACCAGCGGATTCTGTCCGTACGGGCCGAGGTGTC
ATTTTATCCACAATCAAGACGACTCTACTCAACGCAATATGGGCATGCAGATGCCGGCGT
CCGGCATGAGCCAGCAGAAGCCTTGCACGCACGGAGTACCGATCGCTGTACCTACCCCGC
ACGTATCGGAACGTAATCACTACAACCACAGGCCCGCGCAGCTTAACCTGCTCGCTAAAC
AGCTCAGCAACGGGCCAAACTTCGGATCCAATATGGGATTCAACGGAATGCCGCCATCGC
CGCCGTACATGGACATGGGAAACTCGGCTGTCATGTCTCCGACATCGCCGGTATCAGGAA
ACAACGGATCAGCTTTCAGCTTTAATACAGCGGCTCTGGCTGGAATTATTATGCCTACCG
ACAGCACTTTTGAAGTGCTTCGATCTCAGGGACATTTTGAAACCACCGTGAACGACGACA
GTCCTTTTGACTCACTACCAACACCACCCGACTCGGATAGAGAGTCCATGACTGGCTCTC
CACCCGAAAAGCAACGCCTACCCATTTTCCGTTGCCTTTCTCAGTCATAAA
| SMART |
Znf_CCCH (IPR000571) - T[141-168] 3.1E-9 - T[179-206] 8.3E-9 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[141-173] 4.97E-10 - T[176-208] 2.09E-10 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[141-169] 17.178 - T[179-207] 15.92 |
| Pfam |
Znf_CCCH (IPR000571) - T[142-168] 5.1E-11 - T[180-206] 7.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 70.37 % | 161 | 1.35E-46 |
| TISD_HUMAN | 60.909 % | 145 | 4.36E-39 |
| TTP_HUMAN | 69.118 % | 113 | 1.54E-28 |