Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,686

>Boschl.CG.Botznik2013.chrUn.g32977.01.p
MDRKTDRIRTSATGISLRLTDLSAILYTRYLIQEPRSLASYEDDFKTKRMLVLKLALFTV
FAIGTQGQGPSALRCSLTMDLAFLLDSSSSVREENFELIRQFVVNIVQRLDIGPDKTRVS
LARYNSWVDSRFHFNTLTTKQEVLDAVRATPYYGKGTMTAMGLQVMENQHIREYNGWRQN
EFPTVVIVITDGKAKDAADIPAIARRLRSKVTKVIAVGVGRADEAELQLIATRPFEDNVI
YVTEFSQLVSLVLRLADMTCAVRDDVNECRTDNGGCAGFCINTADAFYCECAEGYQVAAD
GLACADVDECADEGTGCSDTCENTPGSFFCSCPPGKATTDNPKICVDDSCYGNTECQQEC
NNIVNGDFYCSCLPGYVLNEDGRTCTDIDECLLGNGGCEFACNNTEGSYECLCDEGYALR
DDGRTCGVQCYVCDRALSNEECDQIQVCPPNALSCQTHVRIEQGVSYISKMCKQTEACVN
NYIQNPRTAWSPTQCNSAGDTISVCRCCCHRSLCNAPADCNTDNIIDIQCPDPSTFDIPD
GLVVNCGGNRLGDRCDLVCPAGYAPASGSTELVCTHKPRTTEGEWLGELGACVDIDECAV
NNGGCSHFCTNSPGSFSCSCYSPFSCNDAPVDVLFILDSSSSVQDVNFQVIREFVARIVN
PLNIGPDAVRVAAMRYNKFQIPEFNFDDVTNNTDLAEKISNIPYDGSGTRTASAINYAIL
NLIMSPDAGRRPSVPLMTVLLTDGRSQDSEQLPDAAKRLHDVSDSVFVIGVSSRVNEEEL
LIIANEKTTNYRALESFDELNEDLVDLVSDNLCTEADGFHELMADGLNCDINECSIDNGG
CSFACNNTIGSYYCSCPPGEVVAEDGRTCVANDCAIENGGCEFRCVQFFGGRRCMCPNTR
VFQDNVCVNYNECADANGGCSHICEDLEDGYRCSCPVGMTETADGLNCEIDSCEEQVWPF
VCSQICENIPGGSYQCRCAEGYLMEDDGHNCTEIDECQFSNGGCEHTCVNTDGSYRCECP
PNYDLRADGKTCGIQCFECVNVADPALECEPVVCEPSADACFTTMRTRNGVTQTTKGCKQ
TMACINNMIQNPGPHGEGPSQCNLNEQNSKCECCCMFSLCNEGDCPYDNFTLPTCPSFQK
AFTVFTGLQDDGRVLAGGIARVDFGEGYTLAETEGALVQIQCAYNFINETAEWDGDYRDL
DTCVDIDECDTENNGGCQAPAFCVNLPGSYECRCPEDPGDYVLVDRFICERDECADLDQG
GCSDNCTNTIGSYFCSCPPGMSIVGEEGLICDPDECMDANGGCHQLCVNLLGTYECRCHA
EGYVIGEDGQTCVDVDECAVDNGQCSDTCTNLEPGFECSCREGYMLQPDGFLCRPNPCFE
NNGGCSQICNVVGEGFECECEAGYELIDDGACVDIDECADGIANCQYNCTNFDGGYTCEC
PPGEALRNDKRTCGRACYVCNGAATNEECNINLEVCPMDADACENEVRVHGGRKSIFKRC
KQAHACNNNRIQNPRDAWMPSQCNADSTNDVCRCCCSGHLCNFNEKPCQRSGDCDLRKAD
VVVLLDSSSSVKYDEFQQMKSFAQDIFSSYTIGQDAVRAALVRYNREVDPRFTLNSFDSL
DDVLDAVDNTVHKGSGTRTGQALQYVLDNEFTAASGAREGVPKILITVTDGKSQVGLPTS
SHAVRS

Nucleotide sequence

Length: 5,061

>Boschl.CG.Botznik2013.chrUn.g32977.01.t
TGGATCGCAAAACTGATCGAATCCGCACAAGTGCCACAGGAATAAGCTTGCGCTTGACGG
ATCTTAGCGCCATTCTTTACACGCGATATTTGATCCAGGAACCAAGAAGTTTAGCCTCCT
ACGAGGACGACTTTAAGACGAAGCGGATGCTCGTGTTGAAGTTGGCGCTATTTACTGTTT
TTGCGATAGGAACCCAAGGACAAGGACCATCAGGATTAAGATGTTCCCTGACCATGGACC
TCGCATTTTTATTGGATTCATCAAGTTCTGTAAGAGAGGAAAATTTTGAATTAATCCGTC
AGTTTGTTGTCAATGTTGTACAACGACTAGATATCGGACCCGACAAAACAAGGGTCTCAC
TCGCGCGATACAACAGCTGGGTGGACTCCCGATTCCATTTTAACACATTAACAACTAAAC
AAGAAGTTCTTGATGCCGTCCGTGCTACCCCGTATTACGGTAAGGGGACCATGACCGCCA
TGGGCCTCCAAGTCATGGAGAACCAACACATCCGCGAATACAACGGATGGAGGCAAAACG
AATTCCCCACTGTCGTAATCGTCATTACCGACGGAAAAGCTAAGGATGCCGCTGATATTC
CAGCGATCGCACGTAGACTGCGATCCAAGGTCACAAAAGTGATTGCTGTCGGTGTGGGCA
GGGCCGACGAAGCTGAACTTCAACTCATCGCCACCAGACCCTTCGAAGACAATGTGATAT
ACGTCACAGAATTTAGTCAACTTGTCAGCTTGGTTCTGAGGCTTGCAGACATGGCGTGCG
CCGTTCGCGATGACGTTAATGAATGCCGAACTGATAACGGCGGATGCGCTGGATTTTGTA
TCAACACAGCCGATGCATTTTACTGCGAGTGCGCTGAAGGCTACCAAGTTGCTGCCGACG
GCCTTGCATGCGCTGGCGTCGATGAATGCGCTGACGAGGGTACGGGATGCAGTGATACGT
GCGAAAACACGCCAGGCTCCTTTTTCTGTTCTTGTCCTCCTGGAAAAGCCACAACTGACA
ACCCTAAAATATGCGGTGACGACAGTTGCTACGGAAACACAGAATGCCAACAAGAGTGCA
ACAATATCGTAAACGGTGACTTCTACTGCTCCTGCTTACCAGGATACGTCTTGAACGAAG
ATGGTCGAACATGCACAGGTATCGATGAGTGCTTGCTTGGCAATGGCGGTTGTGAATTCG
CTTGCAACAATACCGAGGGTTCGTACGAATGCCTTTGCGACGAAGGATATGCCCTTCGCG
ATGACGGACGTACCTGCGGTGTTCAATGCTATGTATGCGACAGAGCTCTATCCAACGAGG
AGTGTGACCAAATTCAAGTCTGCCCTCCCAATGCGGTGTCGTGTCAAACGCACGTGCGAA
TTGAACAAGGAGTCAGCTACATCAGCAAGATGTGCAAGCAAACTGAAGCGTGTGTGAATA
ATTACATCCAGAACCCCAGAACTGCATGGTCCCCTACACAGGGTAACAGTGCCGGTGACA
CAATCTCGGTCTGTCGGTGCTGTTGCCACAGATCCCTTTGCAACGCCCCGGCTGATTGTA
ACACCGATAACATCATCGACATTCAATGCCCCGACCCGTCCACATTCGACATACCCGATG
GTCTTGTGGTGAACTGCGGAGGAAACAGACTAGGAGACAGATGCGATCTCGTCTGCCCAG
CCGGTTACGCGCCAGCCTCGGGAAGTACCGAGCTCGTGTGCACACACAAACCCCGTACTA
CTGAAGGCGAATGGCTGGGCGAATTGGGAGCTTGTGTCGGCATCGACGAATGCGCCGTAA
ACAACGGCGGCTGCTCACACTTCTGCACAAACTCACCTGGGTCATTTTCGTGCAGTTGTT
ACTCGCCTTTTAGCTGCAACGACGCACCCGTCGACGTGCTCTTTATTCTCGACTCGTCTT
CATCCGTCCAGGATGTCAACTTCCAAGTCATTCGGGAGTTCGTCGCGAGAATTGTAAATC
CTCTTAATATTGGCCCAGACGCCGTGCGAGTTGCCGCTATGCGATACAACAAATTCCAAA
TCCCAGAGTTCAACTTCGACGATGTCACAAACAACACGGATCTTGCCGAAAAGATCTCGG
ACATCCCATACGACGGCAGTGGAACAAGAACTGCGTCCGCCATCAACTACGCGATATTAA
ATCTCATCATGAGCCCAGACGCAGGACGAAGACCATCAGTACCGCTTATGACAGTGCTCC
TAACTGACGGAAGATCGCAAGACAGCGAACAACTACCAGACGCTGCCAAGAGACTGCATG
ATGTTTCGGACTCCGTATTCGTTATTGGTGTCTGGTCGAGAGTAAACGAAGAAGAGCTCC
TTATCATCGCCAATGAGAAGACCACGAATTACCGAGCTCTTGAATCTTTCGATGAACTTA
ACGAAGATTTGGTTGATCTCGTGTCTGACAATCTATGCACTGAGGCGGACGGATTCCATG
AGCTTATGGCGGATGGCCTCAACTGCGACATCAACGAGTGCAGCATCGACAACGGAGGCT
GCAGCTTTGCTTGCAACAACACAATCGGATCGTACTATTGCTCATGTCCGCCAGGAGAAG
TCGTTGCTGAAGATGGCAGAACATGCGGTGCTAATGATTGCGCCATCGAAAACGGTGGGT
GCGAGTTCCGATGCGTGCAGTTCTTCGGCGGCCGAAGATGCATGTGCCCCAACACCAGAG
TGGTCCAAGATAACGTTTGCGTTAACTACAACGAGTGCGCCGATGCTAACGGCGGTTGCT
CACACATTTGTGAGGATCTTGAAGATGGATACAGATGCTCCTGTCCCGTTGGAATGACCG
AGACTGCTGACGGACTTAATTGCGGAATCGACAGCTGCGAAGAACAAGTTTGGCCTTTCG
TATGCTCACAAATATGCGAGAATATTCCAGGCGGGTCATACCAATGCCGATGCGCCGAAG
GTTATCTGATGGAAGACGACGGTCACAACTGCACCGGGATCGACGAGTGCCAATTCAGCA
ACGGTGGCTGCGAACACACCTGCGTCAACACCGACGGCTCTTACAGATGCGAATGCCCAC
CCAACTATGACCTACGAGCTGACGGCAAGACATGCGGTATCCAATGCTTCGAATGCGTCA
ACGTCGCCGACCCAGCGCTCGAATGCGAACCGGTTGTCTGCGAACCATCCGCTGACGCGT
GTTTCACCACGATGAGAACAAGGAACGGTGTCACTCAAACTACCAAAGGATGCAAACAGA
CTATGGCTTGCATTAACAACATGATTCAGGACCCAGGCCCCCACGGAGAAGGGCCGAGCC
AGTGCAATCTCAACGAACAAAACTCCAAGTGCGAGTGCTGCTGCATGTTCTCACTCTGTA
ACGAAGGCGACTGCCCATACGACAACTTCACACGTCCCACTTGCCCAAGCTTCCAGAAGG
CATTCACCGTTTTCACCGGACTGCAAGACGATGGACGAGTGCTTGCCGGTGGAATCGCCC
GTGTCGACTTCGGCGAAGGCTACACATTGGCGGAGACGGAAGGAGCTCTTGTACAAATCC
AGTGCGCCTACAACTTCATCAACGAGACTGCTGAATGGGATGGCGACTACAGAGACTTGG
ATACGTGTGTTGGCATCGACGAGTGCGACACTGAAAATAACGGTGGATGCCAAGCCCCAG
CTTTCTGCGTAAATCTGCCGGGAAGCTACGAATGCAGATGCCCAGAAGATCCTGGCGATT
ACGTTCTCGTTGACCGATTCATCTGCGAAAGGGATGAATGCGCCGATTTGGATCAAGGCG
GCTGCTCAGACAATTGTACCAACACGATCGGTAGCTATTTCTGCTCATGCCCACCAGGCA
TGTCCATCGTCGGCGAAGAAGGACTCATTTGCGGTCCCGATGAATGCATGGACGCCAATG
GCGGATGCCATCAACTGTGCGTGAACTTGCTCGGAACATACGAGTGCAGATGTCATGCTG
AAGGATACGTAATTGGAGAGGACGGACAGACTTGCGTTGGCGTGGACGAGTGCGCTGTCG
ACAACGGCCAGTGTTCCGACACCTGTACCAACCTGGAACCCGGATTCGAGTGTTCCTGCC
GGGAAGGATACATGCTGCAACCGGACGGATTCCTCTGCAGGCCGAACCCGTGCTTCGAGA
ACAACGGCGGCTGCTCGCAGATCTGCAACGTCGTAGGCGAAGGCTTTGAGTGCGAATGCG
AGGCAGGCTACGAGCTGATCGACGACGGAGCGTGCGTCGACATCGACGAATGCGCGGACG
GCATCGCCAACTGCCAGTACAACTGCACCAACTTCGACGGCGGCTACACGTGCGAGTGCC
CACCGGGAGAGGCGCTGAGAAACGACAAGCGTACTTGTGGACGAGCGTGCTACGTTTGCA
ACGGCGCTGCCACTAACGAAGAATGCAACATCAACCTCGAAGTCTGCCCGATGGACGCTG
ACGCTTGCGAAAACGAAGTCCGAGTCCACGGCGGCCGAAAATCGATCTTCAAGCGATGCA
AGCAAGCCCACGCCTGCAACAACAACCGTATCCAGAACCCGAGAGACGCGTGGATGCCGT
CTCAGTGTAACGCCGATTCGACCAACGACGTGTGCAGATGCTGCTGCTCGGGACATTTGT
GTAACTTCAACGAGAAACCGTGCCAGCGCTCGGGAGACTGCGATCTGCGAAAGGCCGACG
TCGTCGTCCTGCTGGATTCTTCCAGCTCCGTGAAGTACGACGAGTTCCAGCAGATGAAGA
GCTTCGCGCAGGACATCTTCTCCAGCTACACCATCGGCCAGGACGCCGTCCGCGCGGCCC
TGGTCCGCTACAACCGAGAGGTCGACCCTAGATTCACACTGAACTCGTTCGACAGCCTGG
ACGACGTATTAGACGCGGTCGACAACACCGTGCACAAAGGTAGCGGCACCAGAACCGGCC
AGGCTCTGCAGTACGTCCTCGACAACGAGTTTACCGCGGCTAGCGGCGCGAGAGAGGGAG
TCCCGAAGATTCTCATCACTGTCACAGACGGAAAATCTCAGGTTGGATTACCTACGAGCA
GTCACGCTGTACGCAGTTAAC

InterProScan

SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[75-261] 6.26E-47 - T[626-815] 2.23E-45 - T[1538-1677] 6.26E-35
Gene3D	vWFA_dom_sf (IPR036465) - T[78-271] 5.7E-47 - T[625-820] 1.5E-42 - T[1557-1686] 1.2E-31
SMART	VWF_A (IPR002035) - T[78-260] 3.0E-35 - T[630-812] 4.7E-30 - T[1558-1685] 7.9E-9
ProSiteProfiles	VWF_A (IPR002035) - T[80-255] 29.466 - T[632-808] 29.501 - T[1560-1686] 22.774
Pfam	VWF_A (IPR002035) - T[80-251] 1.3E-38 - T[632-801] 7.6E-34 - T[1560-1676] 2.8E-29
SUPERFAMILY	Growth_fac_rcpt_cys_sf (IPR009030) - T[264-388] 3.53E-13 - T[910-1036] 5.41E-14 - T[1200-1335] 6.28E-10 - T[1336-1455] 3.3E-14
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[265-305] 1.5E-5 - T[306-346] 4.0E-8 - T[348-386] 0.074 - T[387-427] 6.3E-7 - T[594-631] 2.5E-4 - T[830-870] 1.4E-7 - T[909-949] 3.5E-6 - T[950-992] 0.0033 - T[993-1033] 9.6E-8 - T[1205-1248] 2.1E-4 - T[1250-1292] 2.3E-5 - T[1294-1333] 0.0012 - T[1334-1374] 8.2E-7 - T[1414-1454] 2.3E-6
SMART	EGF-like_dom (IPR000742) - T[268-305] 0.26 - T[309-346] 0.049 - T[349-386] 0.54 - T[390-427] 0.038 - T[597-636] 25.0 - T[833-870] 0.095 - T[873-908] 29.0 - T[912-949] 9.6E-5 - T[952-992] 0.043 - T[996-1033] 1.2E-4 - T[1208-1250] 1.4 - T[1253-1292] 0.064 - T[1295-1333] 0.19 - T[1337-1374] 0.0033 - T[1377-1413] 0.052 - T[1417-1454] 0.015
ProSitePatterns	EGF-like_CS (IPR013032) - T[289-304] . - T[411-426] .
ProSiteProfiles	EGF-like_dom (IPR000742) - T[306-346] 6.953 - T[387-427] 7.216 - T[830-870] 7.298 - T[909-949] 8.964 - T[993-1033] 10.546 - T[1205-1250] 9.774 - T[1292-1333] 6.662 - T[1334-1367] 7.955 - T[1414-1454] 8.271
Pfam	EGF-like_Ca-bd_dom (IPR001881) - T[306-343] 1.7E-5 - T[594-626] 0.0019 - T[950-991] 0.0017 - T[1205-1236] 7.3E-6 - T[1252-1288] 2.0E-4 - T[1292-1332] 5.5E-5 - T[1414-1453] 2.3E-6
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[321-332] . - T[402-413] . - T[845-856] . - T[924-935] . - T[1008-1019] . - T[1223-1234] . - T[1307-1318] . - T[1349-1360] . - T[1429-1440] .
Pfam	cEGF (IPR026823) - T[368-390] 3.4E-10
ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[387-411] . - T[594-618] . - T[993-1017] . - T[1205-1232] . - T[1414-1438] .
SUPERFAMILY	Sushi/SCR/CCP_sf (IPR035976) - T[528-595] 6.64E-5
ProSiteProfiles	Sushi_SCR_CCP_dom (IPR000436) - T[528-594] 8.013