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TRANSCRIPT CARD

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  1. Molecular Tool 'Moocci.Tbx6-r.b>Moocci.Lhx3/4.a'
  2. Transcript 'KH2012:KH.S852.1.v2....'
  3. Transcript 'Harore.CG.MTP2014.S2...'
  4. Region 'REG00000797'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g33525.01.t

Possible name(s)

LONRF3; RPAP3; STIP1

Location

chrUn [219,051,330 / 219,054,006]

Sequences

Amino acid sequence

Length: 113

>Boschl.CG.Botznik2013.chrUn.g33525.01.p
MRSAGRSLSTPDVGLSSDAMSFERLRSTLYDNKNEARKEKQKGNEAYKKKQYMNALEHYD
QAIELDASDALLHSNKAAVYICQKRLDEAKSSCLEAMRILQFQADSDDKDIAK

Nucleotide sequence

Length: 342

>Boschl.CG.Botznik2013.chrUn.g33525.01.t
TGCGATCCGCGGGCCGTAGTTTGTCGACCCCTGATGTAGGGCTGTCGTCTGATGCAATGT
CATTCGAACGATTGAGGTCGACATTATATGATAACAAAAATGAGGCGCGCAAGGAGAAGC
AAAAAGGCAACGAAGCGTACAAGAAGAAGCAATACATGAACGCGTTAGAACATTACGATC
AGGCCATCGAGCTCGACGCTTCCGACGCCTTGTTACATTCCAACAAGGCAGCCGTCTACA
TTTGCCAAAAGCGGCTGGACGAAGCCAAGTCCTCGTGTCTCGAGGCCATGCGCATCTTGC
AGTTTCAAGCCGACAGTGACGACAAGGATATCGCGAAGTAAG

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[16-106] 8.2E-19
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[35-99] 4.67E-18
ProSiteProfiles
TPR_repeat (IPR019734) - T[36-69] 8.408
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[36-103] 10.305
SMART
TPR_repeat (IPR019734) - T[36-69] 0.031 - T[70-103] 3.9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value