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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L77.4.v1.B...' > 
  2. Clone 'cign064g08' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g33746.01.t

Possible name(s)

SLC6A11; SLC6A12; SLC6A13

Gene model

Boschl.CG.Botznik2013.chrUn.g33746

Location

chrUn [220,436,744 / 220,443,589]

Sequences

Amino acid sequence

Length: 274

>Boschl.CG.Botznik2013.chrUn.g33746.01.p
MRNYVLRRTEGIHDMGSFSNWRMLLCFLASWAICYLCVWKGIRTTGKAAYITVISPYIIV
FVLLVRGAMLEGAGSGVVYFIYPHIEKLKEPQVWLEAGGQVLYTLGVCFAVLYGLGSYNK
FHTDCYRNAYICVAACCGTSVFVGFVLFCYLGHMAHIQNKNITEIAEQGPGLVFEVFPAG
LTLLPVSQIWAAIFFVMLAFFAIDTAGGIYVFELVNMYGNSGICILLIAFAEVAGISWVY
GIDNFFEDIKSMIGYYPSVLLKYCMRYFDPFIIL

Nucleotide sequence

Length: 822

>Boschl.CG.Botznik2013.chrUn.g33746.01.t
CATGCGCAATTACGTGCTGAGGAGGACCGAAGGCATTCACGATATGGGCTCTTTCTCCAA
CTGGAGGATGCTTTTATGTTTCCTTGCGTCTTGGGCCATCTGTTATTTGTGCGTTTGGAA
AGGAATCAGAACGACAGGCAAGGCGGCTTACATCACGGTCATTTCACCGTACATTATAGT
TTTTGTTCTCCTGGTGCGCGGGGCAATGCTCGAAGGGGCTGGGAGTGGTGTTGTTTACTT
TATATACCCGCACATAGAGAAACTCAAAGAGCCTCAGGTGTGGCTGGAAGCTGGCGGCCA
GGTACTCTACACTTTGGGGGTGTGTTTCGCTGTGCTTTATGGGCTCGGAAGTTACAACAA
ATTCCATACGGACTGCTATAGAAATGCGTACATCTGCGTCGCCGCATGTTGCGGTACATC
AGTCTTCGTGGGATTCGTTCTCTTCTGCTATCTCGGACACATGGCTCACATCCAGAACAA
GAACATCACCGAAATCGCGGAGCAAGGTCCGGGACTTGTTTTCGAGGTCTTTCCGGCGGG
ACTCACATTGCTGCCGGTGTCGCAAATTTGGGCAGCAATTTTTTTCGTAATGCTGGCCTT
CTTCGCTATTGACACCGCGGGCGGGATCTACGTGTTCGAACTTGTGAACATGTACGGAAA
CAGTGGTATTTGCATTTTGCTGATAGCTTTCGCCGAAGTCGCCGGAATATCGTGGGTTTA
TGGGATCGACAATTTCTTTGAGGACATAAAGTCTATGATCGGTTACTATCCGTCTGTGTT
GCTGAAATACTGCATGCGCTACTTCGACCCGTTCATCATTCT

InterProScan

ProSiteProfiles
Na/ntran_symport (IPR000175) - T[1-274] 39.979
PANTHER
Na/ntran_symport (IPR000175) - T[2-205] 4.2E-92 - T[205-272] 4.2E-92
SUPERFAMILY
SNS_sf (IPR037272) - T[2-274] 8.63E-76
Pfam
Na/ntran_symport (IPR000175) - T[3-205] 3.8E-68
PRINTS
Na/ntran_symport (IPR000175) - T[48-65] 6.1E-13 - T[130-150] 6.1E-13 - T[184-203] 6.1E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A12_HUMAN 38.994 % 250 2.75E-79
S6A13_HUMAN 37.143 % 238 1.75E-74
S6A11_HUMAN 37.188 % 232 4.42E-72