Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g33746.01.t

Possible name(s)

SLC6A11; SLC6A12; SLC6A13

Gene model

Boschl.CG.Botznik2013.chrUn.g33746

Location

chrUn [220,436,744 / 220,443,589]

Sequences

Amino acid sequence

Length: 274

>Boschl.CG.Botznik2013.chrUn.g33746.01.p
MRNYVLRRTEGIHDMGSFSNWRMLLCFLASWAICYLCVWKGIRTTGKAAYITVISPYIIV
FVLLVRGAMLEGAGSGVVYFIYPHIEKLKEPQVWLEAGGQVLYTLGVCFAVLYGLGSYNK
FHTDCYRNAYICVAACCGTSVFVGFVLFCYLGHMAHIQNKNITEIAEQGPGLVFEVFPAG
LTLLPVSQIWAAIFFVMLAFFAIDTAGGIYVFELVNMYGNSGICILLIAFAEVAGISWVY
GIDNFFEDIKSMIGYYPSVLLKYCMRYFDPFIIL

Nucleotide sequence

Length: 822

>Boschl.CG.Botznik2013.chrUn.g33746.01.t
CATGCGCAATTACGTGCTGAGGAGGACCGAAGGCATTCACGATATGGGCTCTTTCTCCAA
CTGGAGGATGCTTTTATGTTTCCTTGCGTCTTGGGCCATCTGTTATTTGTGCGTTTGGAA
AGGAATCAGAACGACAGGCAAGGCGGCTTACATCACGGTCATTTCACCGTACATTATAGT
TTTTGTTCTCCTGGTGCGCGGGGCAATGCTCGAAGGGGCTGGGAGTGGTGTTGTTTACTT
TATATACCCGCACATAGAGAAACTCAAAGAGCCTCAGGTGTGGCTGGAAGCTGGCGGCCA
GGTACTCTACACTTTGGGGGTGTGTTTCGCTGTGCTTTATGGGCTCGGAAGTTACAACAA
ATTCCATACGGACTGCTATAGAAATGCGTACATCTGCGTCGCCGCATGTTGCGGTACATC
AGTCTTCGTGGGATTCGTTCTCTTCTGCTATCTCGGACACATGGCTCACATCCAGAACAA
GAACATCACCGAAATCGCGGAGCAAGGTCCGGGACTTGTTTTCGAGGTCTTTCCGGCGGG
ACTCACATTGCTGCCGGTGTCGCAAATTTGGGCAGCAATTTTTTTCGTAATGCTGGCCTT
CTTCGCTATTGACACCGCGGGCGGGATCTACGTGTTCGAACTTGTGAACATGTACGGAAA
CAGTGGTATTTGCATTTTGCTGATAGCTTTCGCCGAAGTCGCCGGAATATCGTGGGTTTA
TGGGATCGACAATTTCTTTGAGGACATAAAGTCTATGATCGGTTACTATCCGTCTGTGTT
GCTGAAATACTGCATGCGCTACTTCGACCCGTTCATCATTCT

InterProScan

ProSiteProfiles	Na/ntran_symport (IPR000175) - T[1-274] 39.979
PANTHER	Na/ntran_symport (IPR000175) - T[2-205] 4.2E-92 - T[205-272] 4.2E-92
SUPERFAMILY	SNS_sf (IPR037272) - T[2-274] 8.63E-76
Pfam	Na/ntran_symport (IPR000175) - T[3-205] 3.8E-68
PRINTS	Na/ntran_symport (IPR000175) - T[48-65] 6.1E-13 - T[130-150] 6.1E-13 - T[184-203] 6.1E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
S6A12_HUMAN	38.994 %	250	2.75E-79
S6A13_HUMAN	37.143 %	238	1.75E-74
S6A11_HUMAN	37.188 %	232	4.42E-72