- Transcript 'KH2012:KH.C8.342.v1....' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g35061.01.t
Possible name(s)
ZFP36; ZFP36L1; ZFP36L2
Gene model
Location
chrUn [229,164,036 / 229,165,053]
Amino acid sequence
Length: 338
>Boschl.CG.Botznik2013.chrUn.g35061.01.p
MNDNFSPLTNQSMAGIRPMQRPMNTVRRNSTSSVTSNPSARNRMNMNSLTTMPNTIPETS
TATLSAAISSIQTDFRGRAYSEGASSLSSDSSVQQQQPVASSRYKTELCRPFEENGKCKY
GDKCQFAHGKHELRHLARHPKYKTELCRTFHTSGFCPYGPRCHFIHNQDDSTQRNMGMQM
PASGMSQQKPCTHGVPIAVPTPHVSERNHYNHRPAQLNLLAKQLSNGPNFGSNMGFNGMP
PSPPYMDMGNSAVMSPTSPVSGNNGSAFSFNTAALAGIIMPTDSTFEVLRSQGHFETTVN
DDSPFDSLPTPPDSDRESMTGSPPEKQRLPIFRCLSQS
Nucleotide sequence
Length: 1,017
>Boschl.CG.Botznik2013.chrUn.g35061.01.t
GATGAACGACAACTTTTCGCCGCTGACGAACCAATCGATGGCCGGCATCAGGCCTATGCA
AAGGCCGATGAATACCGTGCGACGAAACTCTACTTCTTCAGTAACTTCAAACCCCTCAGC
CCGAAATCGTATGAACATGAACTCGCTAACGACTATGCCCAACACGATTCCAGAAACATC
CACTGCAACCTTGTCAGCTGCTATAAGTTCAATCCAAACGGATTTTCGCGGAAGAGCCTA
CAGCGAAGGGGCTAGTTCGTTAAGCTCTGATTCTTCTGTGCAACAACAACAGCCTGTGGC
TTCAAGCAGGTACAAAACTGAATTATGTAGGCCGTTTGAAGAAAATGGAAAGTGCAAATA
CGGGGATAAGTGTCAGTTCGCTCACGGGAAACACGAATTGCGGCATCTGGCGAGACACCC
GAAGTACAAAACCGAGCTCTGCAGGACTTTTCACACCAGCGGATTCTGTCCGTACGGGCC
GAGGTGTCATTTTATCCACAATCAAGACGACTCTACTCAACGCAATATGGGCATGCAGAT
GCCGGCGTCCGGCATGAGCCAGCAGAAGCCTTGCACGCACGGAGTACCGATCGCTGTACC
TACCCCGCACGTATCGGAACGTAATCACTACAACCACAGGCCCGCGCAGCTTAACCTGCT
CGCTAAACAGCTCAGCAACGGGCCAAACTTCGGATCCAATATGGGATTCAACGGAATGCC
GCCATCGCCGCCGTACATGGACATGGGAAACTCGGCTGTCATGTCTCCGACATCGCCGGT
ATCAGGAAACAACGGATCAGCTTTCAGCTTTAATACAGCGGCTCTGGCTGGAATTATTAT
GCCTACCGACAGCACTTTTGAAGTGCTTCGATCTCAGGGACATTTTGAAACCACCGTGAA
CGACGACAGTCCTTTTGACTCACTACCAACACCACCCGACTCGGATAGAGAGTCCATGAC
TGGCTCTCCACCCGAAAAGCAACGCCTACCCATTTTCCGTTGCCTTTCTCAGTCATA
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[102-135] 4.19E-10 - T[138-170] 1.83E-10 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[103-131] 17.178 - T[141-169] 15.92 |
| SMART |
Znf_CCCH (IPR000571) - T[103-130] 3.1E-9 - T[141-168] 8.3E-9 |
| Pfam |
Znf_CCCH (IPR000571) - T[104-130] 4.4E-11 - T[142-168] 6.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TISB_HUMAN | 70.37 % | 161 | 5.4E-47 |
| TISD_HUMAN | 60.909 % | 145 | 1.86E-39 |
| TTP_HUMAN | 69.118 % | 113 | 8.21E-29 |