- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g35410.01.t
Possible name(s)
CXXC1; DIDO1; PHF2
Gene model
Location
chrUn [231,384,028 / 231,388,043]
Amino acid sequence
Length: 202
>Boschl.CG.Botznik2013.chrUn.g35410.01.p
MADSGSISDEITLYCICKSPDIDRFMIMCDRCEEWYHGDCINITEKDSRRIKFFYCKSCR
RKDPFLKIQYRKRKKSHEKEPKKAKKAKRIKENSPKPLKKKRISAAEKPKSKTEKFEEVK
KKASNALLKIETQSHPPIKESSSKKSHQSVRKPDRDDITVKTSQMKTDSSISKEPIKAET
LPVPEAVPSKHMTSKENISTPK
Nucleotide sequence
Length: 606
>Boschl.CG.Botznik2013.chrUn.g35410.01.t
TATGGCAGATTCCGGGAGTATTTCGGATGAGATCACGTTGTATTGCATTTGTAAAAGCCC
GGACATTGACCGCTTCATGATAATGTGTGATCGATGTGAGGAATGGTATCACGGTGACTG
CATCAACATCACAGAGAAAGATTCCAGAAGAATAAAATTCTTCTACTGCAAGTCGTGCCG
TCGAAAGGACCCTTTCTTGAAAATACAATACCGGAAAAGGAAGAAAAGCCACGAAAAAGA
ACCTAAAAAAGCCAAGAAGGCGAAGCGGATCAAAGAGAATTCTCCCAAACCTTTGAAAAA
GAAGAGAATTTCAGCCGCGGAAAAGCCCAAATCGAAAACTGAAAAATTCGAGGAAGTGAA
AAAAAAAGCGAGCAATGCTTTGTTGAAAATTGAGACACAGAGTCATCCTCCGATCAAAGA
GTCGTCCAGTAAAAAGAGTCACCAAAGTGTGCGAAAACCCGACAGAGATGACATCACCGT
AAAGACAAGTCAAATGAAAACAGATTCCAGCATTTCCAAAGAGCCGATAAAAGCAGAAAC
CTTGCCTGTTCCCGAAGCAGTTCCATCCAAGCATATGACAAGCAAGGAGAATATTTCCAC
TCCAAA
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[5-72] 1.53E-18 |
| PANTHER |
CXXC1 (IPR037852) - T[12-115] 3.4E-33 - T[117-168] 3.4E-33 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[12-62] 8.885 |
| SMART |
Znf_PHD (IPR001965) - T[14-60] 8.6E-10 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[14-61] 1.6E-11 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[15-59] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXXC1_HUMAN | 58.824 % | 92.8 | 4.29E-22 |