Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C1.144.v5....' > 
  2. Transcript 'KH2012:KH.C4.686.v1....' > 
  3. Transcript 'KH2012:KH.L18.20.v1....' > 
  4. Transcript 'KH2012:KH.C6.129.v1....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g35836.01.t

Possible name(s)

SMU1; WDR26; WDR47

Gene model

Boschl.CG.Botznik2013.chrUn.g35836

Location

chrUn [234,444,885 / 234,453,311]

Sequences

Amino acid sequence

Length: 238

>Boschl.CG.Botznik2013.chrUn.g35836.01.p
LYVIMTLEIESADVIRLIEQYLKESNLHRTLTTLQEESTISLNTVDSIDGFVSDINNGHW
DTVLQAIQSLKLPDKALVDLYEQIVLELVELRELGAARSLLRQTDPMLALKQSQPDRYVH
LENLLARSYFDPREAYPDGSTKEKRRAAIAQSLAKEVSVVPPSRLMALLGQALKWQQYQG
VDGFIEVWNFATGKIRKDLQFQAQDQFMMMDDAVLCLAFSRDSEMLATGSQDGKIKVK

Nucleotide sequence

Length: 718

>Boschl.CG.Botznik2013.chrUn.g35836.01.t
CTCTACGTAATCATGACCTTAGAAATAGAGTCCGCCGACGTGATACGGTTGATCGAGCAG
TATCTGAAGGAGAGTAATTTGCATCGGACTCTGACAACGCTGCAGGAGGAGTCGACAATA
TCCTTGAACACTGTCGACAGTATCGACGGATTTGTGTCGGACATCAATAACGGACACTGG
GACACTGTTTTGCAGGCCATCCAATCTCTGAAACTCCCGGATAAAGCACTCGTTGACCTG
TACGAACAGATCGTGCTAGAGCTGGTGGAGCTCCGTGAACTGGGGGCAGCTCGATCGCTC
TTACGGCAAACGGATCCCATGCTGGCATTGAAGCAATCACAGCCCGGCCGGTACGTTCAT
CTCGAAAACCTGCTCGCTCGATCGTACTTCGACCCCCGCGAGGCTTACCCCGACGGTTCC
ACTAAAGAGAAAAGGCGCGCAGCTATAGCCCAGTCGCTAGCGAAGGAAGTCAGCGTAGTC
CCGCCTTCGCGTTTGATGGCGCTGCTGGGACAAGCTTTGAAGTGGCAGCAGTATCAAGGG
GTGGACGGCTTTATCGAGGTGTGGAACTTTGCGACGGGCAAGATTCGAAAAGACCTGCAG
TTTCAGGCGCAGGACCAGTTCATGATGATGGACGACGCGGTCCTGTGCCTCGCATTCAGC
CGGGACAGCGAGATGCTGGCCACGGGCTCCCAGGATGGAAAGATCAAGGTAAAATAGC

InterProScan

ProSiteProfiles
LisH (IPR006594) - T[10-42] 10.298
SMART
LisH (IPR006594) - T[10-42] 2.3E-5
SMART
CTLH_C (IPR006595) - T[44-96] 6.6E-8
ProSiteProfiles
CTLH_C (IPR006595) - T[44-96] 11.08
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[155-237] 1.2E-9
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[181-237] 1.39E-7
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[182-238] 9.837
ProSiteProfiles
WD40_repeat (IPR001680) - T[207-238] 9.64

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMU1_HUMAN 65.517 % 372 2.48E-128