Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g37097.01.t

Possible name(s)

LRP1; LRP1B; LRP4

Gene model

Boschl.CG.Botznik2013.chrUn.g37097

Location

chrUn [243,474,503 / 243,476,079]

Sequences

Amino acid sequence

Length: 305

>Boschl.CG.Botznik2013.chrUn.g37097.01.p
MLSEQEARRIIRRHCMTLWDQEYRLCEKELQYKSFNTSVCDSPRTCGIRLIDGIIFRLKS
GHCRLNAHLLIIGIVESPCCSYCRYPETADPEVVQQDTSANGIFSGSILTESNLTTSEYW
ALAAHYRKKLLYFSDYRAQYVAVWDMNKNEMTKYFEGMAHGIESLAIDWKTNNLYWTDSA
LKWVMAADDTFTYYTPVYRTAPDPTYGLAIHSVKRYLIFTTYKTLGSKIIMTDLAGKNEN
VLFEFPSINDVTGLAIDYTDDRYYFLISILFLFFCVRVHSLGFCYITILVPDAFLRQFKL
PFPKC

Nucleotide sequence

Length: 918

>Boschl.CG.Botznik2013.chrUn.g37097.01.t
GATGCTGTCGGAACAAGAAGCTCGTCGTATCATACGTCGTCACTGCATGACGTTGTGGGA
TCAGGAATACCGTTTATGCGAAAAAGAACTTCAATATAAATCCTTCAACACCTCGGTTTG
TGATTCTCCCCGTACTTGTGGAATCCGCCTCATAGACGGCATAATTTTTCGTTTGAAATC
TGGACATTGCCGATTAAACGCACATTTGCTTATAATTGGAATAGTTGAATCTCCTTGTTG
TAGTTACTGCCGCTACCCCGAAACGGCCGATCCAGAAGTTGTACAACAAGATACTAGTGC
AAACGGTATATTTAGTGGCAGCATTTTGACCGAGAGCAACCTTACCACGTCTGAATATTG
GGCTTTGGCGGCCCATTACCGCAAGAAGCTTCTATATTTTTCTGACTACAGAGCCCAATA
CGTCGCTGTATGGGATATGAACAAGAACGAGATGACCAAGTATTTCGAAGGAATGGCGCA
TGGAATCGAGAGCCTGGCGATTGATTGGAAGACTAACAATCTTTATTGGACCGACTCCGC
TCTTAAATGGGTGATGGCTGCAGATGACACCTTCACCTATTACACACCGGTCTACAGAAC
AGCGCCAGATCCGACATACGGATTAGCCATTCATTCAGTCAAAAGATACCTCATCTTTAC
TACATACAAGACTCTTGGGTCGAAAATCATCATGACAGATCTGGCTGGGAAAAATGAGAA
TGTTCTTTTCGAGTTTCCGAGCATAAACGACGTCACGGGGCTTGCCATTGACTACACAGA
CGACAGGTATTATTTTCTAATTTCCATACTATTTCTGTTCTTCTGTGTACGAGTTCATAG
CTTAGGCTTTTGCTACATCACGATATTGGTGCCAGATGCATTTTTACGCCAGTTTAAATT
GCCTTTCCCAAAATGTTA

InterProScan

Gene3D	6-blade_b-propeller_TolB-like (IPR011042) - T[93-280] 3.1E-25
SMART	LDLR_classB_rpt (IPR000033) - T[111-151] 11.0 - T[152-192] 1.4 - T[195-239] 61.0

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value