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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g37210.01.t
Possible name(s)
UBR1; UBR2; UBR3
Gene model
Location
chrUn [244,204,028 / 244,208,777]
Amino acid sequence
Length: 1,551
>Boschl.CG.Botznik2013.chrUn.g37210.01.p
MLQTSGRNANISDYLSATSTEFEGAFHELIKDEVVKIIRSEKTWSVGSVLEEDQVKTLIG
NIFRWLLAGELEDSLAALEKLNSPSQICGRVFKPGEPTYSCRDCAMDPTCVLCHTCFWKS
EHSKHRYRMNASGGGGCCDCGDSEAWHNFPACSSHKSDANDSESEEKELNLPNDIQSKAP
YFFEAILKYVVEHITETKTNLTDLPSSLRPTIDIKSFSTVLFNDESHTFDFVIHVLRDAL
KCTESEAADFATVVDREGRSIICIGDEGKCENAKRIVTSRPTSLLLFRTSDPLKTVVMHI
TNLAHQELAVQLLPALSDMVMRSEGLREIFCSVAMSQNISRQSENNVQYSSAIELLMRCD
HELWKTPRNHYLQVIMNSILLNADAKKSFAVLFTKLYGAIQDGFLKGDHDHSQSVAVLSV
QLYTVPSISRYLIERENVIGRILHSLTKTFYVEPDAGLDPDWCRAIKIDRKKMRHTIRRM
AYTFHDLRYIFAVIPTDWTPALKSEFLNGLKYVLQLLLSIHGLDQTVRRTDAHIEHEPDW
ETSITLMMRIYPIIKRSLKWISSDTGLLFDALHFCLMCLKNLQDSENAGIQKISHGGQQY
QCIDYDISSRAVSSHYPIPRLIVAILVELSNKGFDWQEIKSNPSLAGLMEHPLFGIRLQE
YSLRSLSLNAQVVSGMWKRNGLSLVNQIVFYKDYRCRQEAYERDIQMMQFCASVVDPDHF
LVNLQYKMNFLNHGCSQDQYAKLTSEVFTILIAAVGERYIPGVSDVTETACIERKIIHIL
AVETKPRSKIMKVLPENITDQVDLEPILRKVADFREPANANSIGKYSLKADVLNEFCPYA
YQYSFADEDKAQQTIIKRKSSQNSPTFFIPPKLPKFSKLFCKTPFILCSDTFISLMSGFL
QKVVAGDNEMCHDKIVRRGLYLIAMAVVESKHHMQNETSKFDFLAKCISGCEASILFLLQ
KLETMEAHASHKDFVAWMIAEIESMTNLKRGAREHGSSVDHPSYPKTEVKAEGSGQNARK
QRAQELRSKLLLQMKTMQQNFLSQNPDLLGEDLPTAEETVSIPQATQNRTCMDASAQEQA
ANQPEESHTCMLCQEDSASSDGAMVMAAFVQRSSVQRRGTYVERQELNHPFLHISFPTGI
HSSTCSHAMHYECFKQFRKSSSDSRLFRHRHHRGYSEPPDSEFVCPLCSRLSNTVIPFMC
RSIVHQKRSRSQDDQDRNISDMEVTDDESLTLNDWLKHVCCAEEQFFDSSSVVIPDDEKE
SSSYDPEDFMSVDGSPTSSNQSADKSENLRNSFDEFVYDILKESSLDLQNNNMLSRQSAL
WLSAVTTLSCTENALRLENGSVLSKLQVRQSAALEGVLGSVYALKNTHAQNDDTFEKLFN
CIDGDASLPALLNCNVFSVFCYLWFSADEKKDGAGLTGVISFERKILRLCSLAQLVQIFV
RMKVADLELTCDNVGSSSAVENLVENCNSVRSIAGLNQLSDNVSRVGFSKLVKTCMLPFL
RCCTLFLRHLTGVAPCVDAADEAIDEFACVMKYLDLPENLSSILDFDDGLQ
Nucleotide sequence
Length: 4,653
>Boschl.CG.Botznik2013.chrUn.g37210.01.t
CATGCTGCAGACGAGTGGCCGAAATGCCAATATTTCAGACTACCTTTCTGCAACGTCGAC
AGAATTTGAAGGTGCCTTCCATGAACTGATCAAGGATGAGGTCGTTAAGATAATCAGAAG
TGAAAAGACATGGTCTGTTGGCTCTGTCTTGGAGGAAGACCAGGTCAAAACCTTGATTGG
AAATATATTCAGGTGGCTTCTGGCTGGTGAGCTCGAAGATAGCCTGGCCGCGCTCGAAAA
GCTCAATAGTCCATCGCAGATATGTGGTAGGGTGTTTAAGCCCGGCGAGCCAACCTACTC
GTGTCGTGATTGCGCCATGGATCCCACCTGTGTGCTGTGTCATACATGCTTTTGGAAAAG
TGAACACAGCAAGCACAGATACCGCATGAATGCCTCCGGTGGAGGTGGTTGCTGTGACTG
CGGCGACAGTGAAGCGTGGCACAATTTTCCTGCTTGTTCCAGTCATAAATCCGATGCAAA
CGACAGTGAATCGGAAGAAAAGGAGTTGAACTTGCCGAACGATATTCAATCGAAGGCGCC
GTATTTTTTTGAAGCAATATTGAAGTATGTGGTTGAGCATATAACAGAAACAAAAACCAA
CCTGACAGATCTGCCAAGCTCGCTGCGTCCAACTATTGACATCAAATCCTTTTCAACCGT
TTTGTTCAATGACGAATCTCACACTTTTGATTTCGTTATTCACGTTCTGAGAGACGCGCT
CAAATGCACCGAATCGGAGGCCGCAGATTTTGCGACTGTGGTTGACAGGGAAGGCCGTTC
CATTATTTGTATTGGTGATGAAGGAAAGTGTGAGAACGCGAAAAGAATTGTGACAAGTCG
ACCGACGTCTTTGTTACTGTTTCGGACGTCGGACCCTCTGAAAACCGTGGTTATGCACAT
CACAAATTTGGCCCACCAGGAATTGGCGGTTCAGTTACTACCCGCACTGTCTGATATGGT
GATGCGGTCCGAGGGCCTCCGTGAGATATTCTGTTCGGTTGCGATGAGTCAGAACATATC
CCGGCAGAGTGAAAACAACGTCCAGTATTCAAGTGCGATCGAACTACTGATGAGATGCGA
CCACGAACTTTGGAAGACTCCACGCAATCACTACCTTCAGGTAATCATGAACAGCATACT
GTTGAATGCGGATGCAAAAAAATCGTTCGCGGTACTATTCACCAAGTTGTACGGCGCAAT
ACAGGACGGGTTCTTGAAAGGCGATCACGACCATTCTCAGTCTGTGGCGGTGTTATCCGT
TCAGCTGTACACGGTCCCGTCGATTTCAAGGTATCTCATCGAACGTGAAAATGTGATCGG
CCGAATCCTACATTCCCTAACGAAAACGTTTTATGTAGAGCCCGACGCCGGTTTGGATCC
TGACTGGTGTCGAGCGATCAAAATTGATCGAAAAAAGATGCGGCATACGATTCGCAGAAT
GGCATATACCTTCCACGATCTTCGGTACATATTTGCGGTGATTCCAACGGACTGGACCCC
TGCTTTGAAAAGCGAATTTTTAAACGGGTTGAAGTACGTTCTGCAATTGCTTCTGTCTAT
CCACGGATTGGATCAGACGGTCCGAAGGACAGACGCGCACATTGAACATGAACCAGACTG
GGAGACGAGTATCACTTTAATGATGAGAATTTATCCCATCATCAAGCGCTCGCTAAAATG
GATATCCAGCGATACGGGATTGCTTTTTGATGCGCTTCACTTCTGCCTCATGTGTCTGAA
AAACTTGCAAGATTCTGAAAACGCAGGAATTCAGAAAATATCACACGGCGGCCAGCAATA
TCAATGCATCGATTATGACATAAGTTCGAGAGCGGTGTCGTCTCATTATCCGATTCCACG
CTTGATTGTAGCAATCCTTGTTGAACTCAGTAACAAAGGTTTCGATTGGCAAGAGATCAA
ATCGAACCCGTCGCTGGCAGGTCTGATGGAACATCCTCTCTTCGGGATTCGACTGCAAGA
ATACAGTCTACGGAGTCTCAGTCTGAATGCTCAGGTGGTCAGCGGAATGTGGAAACGCAA
CGGTCTATCTTTGGTCAATCAGATCGTGTTCTACAAGGACTACAGGTGCAGACAGGAAGC
GTATGAACGGGATATTCAAATGATGCAGTTCTGCGCATCAGTTGTGGACCCTGACCATTT
TCTAGTGAACTTGCAGTACAAGATGAATTTTCTGAACCACGGATGCTCGCAAGACCAATA
CGCCAAGTTGACTAGTGAGGTATTCACTATTCTGATCGCAGCCGTCGGCGAAAGATACAT
ACCCGGTGTGTCCGACGTTACCGAAACTGCATGTATCGAAAGGAAAATTATCCACATTCT
AGCTGTTGAGACAAAGCCGAGGTCGAAAATCATGAAGGTGCTACCAGAGAATATAACCGA
CCAAGTCGATTTGGAACCGATACTGCGCAAAGTCGCAGATTTTCGCGAACCGGCAAACGC
CAATTCTATCGGGAAGTATTCGTTAAAAGCAGATGTCCTGAACGAATTTTGCCCGTACGC
ATATCAATACAGCTTTGCCGACGAGGACAAAGCACAGCAGACTATAATCAAACGAAAATC
TTCACAAAACTCCCCGACGTTTTTTATTCCGCCGAAATTGCCCAAGTTTTCAAAGTTATT
CTGTAAGACCCCGTTTATTTTGTGTTCCGACACCTTCATCTCTCTCATGTCCGGATTTCT
TCAGAAAGTGGTCGCCGGCGATAACGAAATGTGTCACGACAAGATTGTCCGCAGAGGGTT
GTACCTGATTGCGATGGCCGTTGTCGAAAGTAAACACCACATGCAGAACGAGACGTCGAA
GTTTGATTTCTTGGCGAAATGCATATCGGGCTGCGAGGCAAGCATTCTGTTCCTTTTGCA
AAAGCTTGAGACGATGGAAGCGCACGCTTCTCACAAAGATTTCGTCGCGTGGATGATTGC
GGAAATCGAGAGTATGACTAATTTGAAGAGAGGGGCACGCGAGCACGGATCGTCAGTCGA
TCATCCGTCGTATCCCAAGACGGAAGTGAAGGCCGAAGGTTCCGGTCAAAACGCACGCAA
GCAAAGAGCACAGGAGCTGCGTTCCAAGTTGCTTTTGCAAATGAAAACGATGCAACAAAA
CTTTTTGTCACAAAATCCGGACTTGCTGGGAGAAGACTTGCCGACGGCAGAAGAGACCGT
GTCCATACCTCAAGCGACGCAGAACCGTACGTGCATGGACGCTTCGGCACAGGAGCAAGC
GGCCAATCAGCCGGAAGAGTCCCACACATGCATGCTTTGCCAAGAGGATTCTGCGTCATC
AGACGGCGCAATGGTCATGGCGGCGTTTGTCCAAAGATCAAGCGTCCAACGCAGGGGTAC
TTACGTTGAACGGCAAGAGTTGAATCATCCGTTTCTTCACATTAGTTTTCCTACTGGGAT
ACACAGCAGCACTTGCAGCCACGCGATGCATTACGAGTGCTTCAAGCAATTTCGTAAATC
GTCGAGCGACTCGAGGCTGTTCCGCCACAGGCACCACCGCGGCTATAGCGAGCCGCCTGA
CAGCGAATTTGTATGTCCTCTCTGTAGTCGACTTAGCAACACTGTGATACCGTTTATGTG
CCGAAGTATCGTTCACCAGAAAAGGAGTCGATCGCAAGATGACCAGGACAGGAATATTTC
AGACATGGAAGTCACCGATGACGAATCGCTCACTCTAAATGATTGGTTGAAGCACGTGTG
CTGTGCTGAAGAACAATTTTTCGATAGTTCTTCGGTAGTTATACCAGATGACGAGAAAGA
ATCGAGTTCTTACGATCCAGAAGACTTTATGTCGGTTGACGGATCGCCGACTTCGAGCAA
TCAATCTGCCGATAAATCTGAGAATTTGAGAAACAGTTTCGATGAGTTCGTTTATGACAT
ACTAAAGGAGTCGTCGCTTGATCTTCAGAACAACAACATGCTGTCTAGGCAATCGGCATT
ATGGCTGTCGGCAGTGACAACGTTATCGTGTACGGAAAACGCCCTGAGACTCGAAAACGG
ATCGGTCCTGTCAAAGCTTCAGGTGAGGCAATCCGCCGCACTGGAAGGCGTATTGGGTTC
GGTGTACGCGCTGAAAAATACACACGCCCAAAACGACGACACTTTCGAAAAGCTGTTCAA
CTGCATCGACGGGGACGCGTCGCTACCGGCTCTGTTGAACTGCAACGTTTTTAGCGTGTT
CTGTTACCTCTGGTTCAGCGCGGACGAGAAGAAAGATGGTGCCGGATTGACGGGTGTAAT
TTCCTTCGAAAGAAAAATTTTACGGCTCTGCTCGCTTGCCCAACTCGTGCAGATTTTTGT
CCGGATGAAAGTCGCCGACCTGGAATTGACCTGCGACAACGTGGGCAGTTCCAGCGCGGT
GGAAAATCTGGTCGAAAATTGCAATTCAGTACGTTCGATAGCGGGATTGAACCAACTCTC
TGACAACGTGTCACGCGTTGGCTTTTCAAAACTTGTGAAGACCTGCATGCTGCCTTTTCT
TCGGTGTTGCACTTTGTTCCTGAGGCATCTAACGGGAGTTGCCCCCTGTGTAGACGCTGC
TGACGAAGCGATTGACGAATTCGCTTGCGTGATGAAATATTTGGATTTGCCGGAAAATCT
GTCATCCATACTGGACTTTGACGATGGCCTGCA
| ProSiteProfiles |
Znf_UBR (IPR003126) - T[86-157] 10.324 |
| SMART |
Znf_UBR (IPR003126) - T[86-156] 1.3E-23 |
| Pfam |
Znf_UBR (IPR003126) - T[88-155] 1.0E-18 |
| Gene3D |
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[199-287] 1.6E-6 |
| Pfam |
ClpS_core (IPR003769) - T[215-280] 1.1E-17 |
| SUPERFAMILY |
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[215-279] 7.85E-12 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[772-855] 1.77E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBR1_HUMAN | 29.582 % | 595 | 0 |
| UBR2_HUMAN | 32.127 % | 659 | 0 |