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TRANSCRIPT CARD

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  1. Clone 'cilv033h10'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g37266.01.t

Possible name(s)

PPIA; PPIB; PPIC

Location

chrUn [244,581,561 / 244,587,833]

Sequences

Amino acid sequence

Length: 239

>Boschl.CG.Botznik2013.chrUn.g37266.01.p
YGEIQSSLVLQVEDDTNEDSKKDTEMKDESTDETEEKKDDDEELPKTINIDGREIEIERA
DRTVTAEVTFEISFGTESMGNITFGLFGKQCPKTVRNFVTLANPLRNHGEGYKGSKIHRI
VRGFAIQGGDYTNNDGSGGWSIYGRFFRDENFSINHFPFCLAMANSGPNTNGSQFFIPII
RTKWLDGKHVVFGQVESGHKLIKSINEVRVNRFSRPLRQVWISNTWTSVKKLERTKTEL

Nucleotide sequence

Length: 721

>Boschl.CG.Botznik2013.chrUn.g37266.01.t
GGTATGGCGAGATCCAATCTTCCTTGGTGTTGCAGGTAGAAGACGACACTAATGAAGATA
GTAAAAAAGATACAGAAATGAAAGATGAAAGCACTGATGAAACAGAAGAAAAAAAAGATG
ATGACGAGGAATTGCCGAAAACAATAAATATGGATGGGAGGGAAATTGAAATCGAGCGCG
CTGATCGGACAGTGACCGCCGAAGTGACCTTTGAAATCAGCTTTGGAACTGAGTCGATGG
GAAATATCACATTCGGTCTTTTCGGAAAGCAGTGCCCGAAAACCGTGAGGAATTTTGTAA
CTCTCGCCAATCCACTCAGAAACCATGGAGAAGGCTACAAAGGAAGCAAGATCCATCGTA
TCGTGAGGGGATTTGCTATTCAAGGTGGTGACTACACCAACAACGATGGTAGTGGAGGAT
GGAGCATCTATGGAAGATTCTTCAGAGACGAAAATTTCTCCATCAACCACTTTCCCTTCT
GCCTTGCAATGGCCAATTCAGGACCCAATACGAACGGATCCCAGTTCTTCATTCCCATCA
TTCGCACAAAATGGCTGGATGGAAAACATGTGGTTTTCGGACAAGTTGAAAGTGGACACA
AACTAATCAAAAGCATCAATGAAGTTAGAGTAAACAGATTCAGCCGACCACTAAGACAAG
TATGGATTTCGAACACATGGACAAGTGTGAAGAAATTGGAAAGAACCAAAACTGAGTTGT
A

InterProScan

PANTHER
Cyclophilin-type_PPIase (IPR024936) - T[50-224] 3.9E-60
Gene3D
Cyclophilin-like_dom_sf (IPR029000) - T[53-236] 7.3E-62
PIRSF
Cyclophilin-type_PPIase (IPR024936) - T[56-232] 7.2E-58
SUPERFAMILY
Cyclophilin-like_dom_sf (IPR029000) - T[63-226] 2.63E-54
ProSiteProfiles
Cyclophilin-type_PPIase_dom (IPR002130) - T[69-227] 34.656
Pfam
Cyclophilin-type_PPIase_dom (IPR002130) - T[74-224] 1.8E-39
PRINTS
Cyclophilin-type_PPIase_dom (IPR002130) - T[86-101] 3.8E-28 - T[117-129] 3.8E-28 - T[159-174] 3.8E-28 - T[174-186] 3.8E-28 - T[187-202] 3.8E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PPIA_HUMAN 51.049 % 144 1.82E-43
PPIB_HUMAN 49.693 % 169 1.37E-52
PPIC_HUMAN 51.22 % 162 4.29E-50