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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g37955.01.t

Possible name(s)

AP4M1; ARCN1

Gene model

Boschl.CG.Botznik2013.chrUn.g37955

Location

chrUn [249,256,850 / 249,263,869]

Sequences

Amino acid sequence

Length: 494

>Boschl.CG.Botznik2013.chrUn.g37955.01.p
VLLAAAVMTKNGRAIISRQFVEMTRSRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPL
EKMYMLLITTKNSNILEDLETLRLFSRLIPEYCKILDENDVQEHAFELIFAFDEVVALGY
RESVNLAQIRTFTEMDSHEEKVFKAVRKTQEDEARAAMKRKAKELTQQRRDQTRSRGYGS
SAGGYSSSKMDMGPTTIIAPEPTKPKTAPTRSTGRAMKLGGKSKDTDSFVDKLRSEGEIV
TSGAKKKSAEAAKTSVPAALKESVHVSVEERLSVTADRDGGLEQMQLQGRCNVHVSDEKF
SSIVVVLQKDEENGCQIQTNPSVDKKAFMDKGVLGFKNAKPIPTKQDVGLLRWRLQTTDE
ALMPLSINCWPNEDGAGGCDVNIEYELQVDGLELADVRVSIPLPSGVGAPNVAEAAGEYK
HDSRKNILEWILPVVDDSSKTGAMEFSIQGCSDDFFPINVSFHSTKTIYTDMKVSYCIIW
IYMKHQRIYIVPRK

Nucleotide sequence

Length: 1,485

>Boschl.CG.Botznik2013.chrUn.g37955.01.t
TTTTGCTTGCTGCTGCTGTGATGACCAAAAATGGTCGTGCAATCATCTCAAGACAGTTTG
TTGAAATGACACGCTCTCGCATTGAGGGTCTTCTTGCTGCATTCCCCAAATTGATGAACA
CAGGAAAGCAGCACACATTCGTTGAAACAGAATCAGTACGATATGTTTATCAACCACTAG
AGAAGATGTATATGCTTCTTATTACAACAAAGAATAGTAATATTTTAGAAGACTTAGAGA
CGCTACGCTTGTTTTCTCGTTTGGTTCCGGAATATTGCAAAATCCTGGATGAAAACGATG
TGCAAGAACATGCATTTGAACTGATTTTTGCATTTGATGAAGTAGTTGCTCTTGGATATC
GTGAAAGCGTGAATTTAGCTCAAATCAGGACCTTTACAGAGATGGACTCCCATGAAGAAA
AGGTTTTCAAGGCTGTACGCAAGGCTCAAGAAGACGAGGCAAGAGCCGCAATGAAGAGGA
AAGCCAAGGAACTCACACAGCAGCGAAGAGATCAAACCCGCTCAAGAGGTTATGGTAGCT
CGGCGGGTGGTTATAGTTCTTCCAAGATGGATATGGGTCCAACTACCATTATAGCTCCAG
AGCCGACAAAACCTAAAACTGCACCTACCAGGAGTACGGGTCGTGCCATGAAGCTCGGTG
GGAAATCTAAAGATACCGATTCTTTTGTCGATAAATTGAGATCGGAAGGTGAAATTGTTA
CCAGCGGTGCCAAAAAGAAGTCTGCAGAAGCTGCCAAAACGTCTGTACCTGCAGCTTTGA
AAGAAAGGGTTCACGTATCAGTCGAAGAACGATTAAGCGTCACAGCGGATCGCGATGGCG
GTTTGGAACAAATGCAATTGCAGGGGCGGTGCAATGTTCACGTCTCTGATGAAAAGTTTT
CTTCCATCGTTGTTGTTCTGCAAAAGGACGAGGAGAACGGATGCCAAATCCAGGCCAATC
CGAGCGTGGACAAGAAGGCTTTCATGGATAAAGGCGTTCTAGGATTCAAAAATGCAAAAC
CCATTCCGACGAAGCAAGATGTCGGCCTTCTTCGGTGGAGATTGCAAACGACTGACGAAG
CATTGATGCCGTTGAGCAGAAATTGCTGGCCAAATGAAGATGGCGCTGGCGGTTGCGACG
TCAATATTGAATACGAACTGCAAGTGGACGGTCTGGAACTGGCAGATGTCCGTGTCTCGA
TTCCTTTACCGTCGGGTGTTGGTGCACCAAATGTGGCCGAAGCGGCTGGTGAATACAAAC
ATGATTCGAGAAAGAATATATTAGAATGGATTTTGCCTGTCGTCGATGACTCCAGCAAGA
CTGGTGCAATGGAATTCAGCATTCAAGGATGCTCAGACGATTTCTTCCCGATCAATGTCT
CATTTCACTCGACTAAGACGATATACACTGATATGAAGGTATCATATTGCATCATTTGGA
TTTACATGAAACATCAAAGAATTTATATTGTACCACGGAAATGAT

InterProScan

PANTHER
Coatomer_dsu (IPR027059) - T[1-475] 2.4E-197
SUPERFAMILY
Longin-like_dom_sf (IPR011012) - T[5-141] 1.01E-29
Pfam
MHD (IPR028565) - T[257-477] 2.7E-29
ProSiteProfiles
MHD (IPR028565) - T[261-494] 26.843
SUPERFAMILY
AP2_Mu_C_sf (IPR036168) - T[261-481] 1.27E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COPD_HUMAN 61.237 % 610 0