- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g38113.01.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
chrUn [250,433,567 / 250,435,131]
Amino acid sequence
Length: 375
>Boschl.CG.Botznik2013.chrUn.g38113.01.p
MDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKANREKMT
QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAIIRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAATSSCIEKSY
ELPDGQVITIGNERFRCPEAMLQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMFPGIADRMQKEIQALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,128
>Boschl.CG.Botznik2013.chrUn.g38113.01.t
TATGGATGACGATGTTGCTGCTCTCGTCGTAGACAATGGCTCCGGCATGTGCAAAGCCGG
TTTTGCCGGAGACGACGCTCCACGAGCCGTGTTCCCTTCGATCGTCGGTCGTCCACGCCA
TCAGGGTGTGATGGTCGGCATGGGCCAGAAAGACAGCTATGTCGGAGACGAAGCTCAAAG
CAAAAGAGGAATCTTGACCCTTAAATATCCAATCGAACACGGTATCGTTACAAACTGGGA
CGACATGGAGAAAATCTGGCATCACACTTTCTACAACGAACTCCGTGTGGCCCCGGAGGA
ACACCCGTGTCTATTAACCGAAGCCCCTCTTAACCCTAAAGCTAACCGAGAAAAGATGAC
GCAAATCATGTTTGAAACTTTCAACGCTCCGGCTATGTACGTAGCTATCCAAGCCGTGCT
GTCTCTGTACGCATCGGGACGTACTACAGGTATTGTCATGGATTCCGGCGACGGCGTCTC
GCACACAGTACCGATTTACGAAGGTTACGCGCTGCCTCACGCAATCATCCGTCTTGACCT
TGCCGGCCGAGACCTCACGGATTATCTCATGAAAATCCTAACCGAACGTGGTTATTCTTT
CACGACGACAGCCGAACGCGAAATTGTCCGCGACATCAAGGAGAAATTGTGTTACGTTGC
TTTGGATTTCGAGCAAGAAATGACGACCGCCGCCACGAGCAGCTGTATCGAAAAGAGCTA
CGAGCTTCCAGACGGTCAAGTTATCACAATCGGCAACGAGCGATTCAGGTGTCCCGAAGC
GATGCTTCAGCCGTCTTTCATCGGCATGGAGAGCGCCGGTATTCACGAAACAACATACAA
TTCCATCATGAAATGCGACGTTGACATCCGTAAAGACTTGTACGCTAATACCGTTCTGTC
CGGCGGTACTACTATGTTCCCCGGCATCGCTGATCGCATGCAGAAAGAAATCCAGGCTCT
CGCCCCGACAACCATGAAAATCAAAATCATCGCCCCTCCGGAGAGGAAATACTCCGTATG
GATCGGAGGCTCTATTCTCGCGTCACTGTCAACGTTCCAGCAAATGTGGATCTCTAAACA
GGAATACGACGAATCCGGGCCGTCGATTGTGCACAGGAAATGCTTCTA
| PANTHER |
Actin (IPR004000) - T[1-374] 5.2E-270 |
| Pfam |
Actin (IPR004000) - T[3-375] 1.3E-149 |
| SMART |
Actin (IPR004000) - T[5-375] 1.1E-238 |
| PRINTS |
Actin (IPR004000) - T[26-35] 9.9E-58 - T[49-60] 9.9E-58 - T[61-83] 9.9E-58 - T[115-128] 9.9E-58 - T[140-159] 9.9E-58 - T[236-252] 9.9E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[53-63] . - T[356-364] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[104-116] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 94.4 % | 753 | 0 |
| ACTB_HUMAN | 95.467 % | 758 | 0 |
| ACTA_HUMAN | 92.246 % | 737 | 0 |