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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g39300.01.t
Possible name(s)
PTPRA; PTPRE; PTPRT
Gene model
Location
chrUn [258,975,858 / 258,978,912]
Amino acid sequence
Length: 167
>Boschl.CG.Botznik2013.chrUn.g39300.01.p
MSILKGDSRWLGPYLIENHVSDDNNRVVLPLKPGQERTDYINASLVEGFKVKEAFIATQG
PLQETIDDFWMMAWVKKTQNIVMLTSLVEKGQDACARYWPEELNDEETHGDITVKFVHKD
DDDVVDYIVREFTLTRDSMAAAKVDTTITRVLAVAARPIGQLGHCPT
Nucleotide sequence
Length: 504
>Boschl.CG.Botznik2013.chrUn.g39300.01.t
TGAGCATTTTAAAAGGAGACTCACGATGGCTGGGTCCATATCTCATTGAGAATCACGTTT
CAGATGACAACAACAGAGTCGTGTTGCCACTGAAGCCAGGCCAGGAGCGAACTGATTATA
TTAACGCGTCGCTTGTTGAGGGCTTCAAAGTAAAAGAAGCATTCATCGCCACCCAAGGGC
CATTACAAGAAACAATAGACGACTTCTGGATGATGGCTTGGGTCAAAAAGACTCAGAATA
TCGTCATGCTTACCAGTCTCGTGGAGAAAGGTCAGGATGCGTGCGCTCGATATTGGCCGG
AAGAGCTGAACGATGAAGAGACCCATGGTGACATCACTGTGAAATTTGTTCACAAAGACG
ACGACGACGTAGTCGACTACATCGTGAGAGAGTTCACGCTCACGCGAGATTCCGTGGCAG
CCGCTAAGGTAGACACCACCATTACTCGAGTCCTAGCAGTGGCGGCTCGTCCTATAGGGC
AACTGGGGCATTGCCCCACCTAAA
| SMART |
PTPase_domain (IPR000242) - T[2-157] 2.6E-7 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[13-167] 25.426 |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[16-153] 1.6E-40 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[18-137] 3.86E-39 |
| Pfam |
PTPase_domain (IPR000242) - T[20-140] 3.1E-35 |
| PRINTS |
PTPase_domain (IPR000242) - T[39-46] 1.5E-7 - T[55-75] 1.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRT_HUMAN | 42.017 % | 107 | 2.18E-27 |
| PTPRA_HUMAN | 47.748 % | 115 | 1.54E-30 |
| PTPRE_HUMAN | 47.107 % | 113 | 1.39E-29 |