Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g39543.01.t

Possible name(s)

CPXM2; F8; MFGE8

Gene model

Boschl.CG.Botznik2013.chrUn.g39543

Location

chrUn [260,918,735 / 260,921,785]

Sequences

Amino acid sequence

Length: 109

>Boschl.CG.Botznik2013.chrUn.g39543.01.p
KVGEWIQVDFGTVKKVAGVITQGRPTLYSQWVRQYKVACGMNDDSLTTIQVGGSDKIYTG
NSDMGTKVYNRFPTVLSCRYIRIYPQSWNNHMSMRLEFVHGHCFDRNPW

Nucleotide sequence

Length: 332

>Boschl.CG.Botznik2013.chrUn.g39543.01.t
CAAAGTCGGTGAATGGATACAAGTTGACTTCGGAACGGTGAAAAAGGTGGCAGGAGTGAT
CACGCAAGGGCGTCCAACGTTGTACAGTCAGTGGGTGCGCCAATACAAAGTGGCGTGTGG
TATGAATGATGACAGTCTGACAACCATTCAAGTCGGCGGCTCCGATAAGGTCTACACAGG
GAATTCTGACATGGGGACGAAAGTCTACAATCGCTTTCCAACGGTACTATCATGCCGATA
CATTCGAATTTATCCTCAGTCGTGGAACAATCACATGTCTATGAGGCTTGAATTCGTGCA
TGGGCACTGCTTTGACAGGAACCCGTGGTAAT

InterProScan

Gene3D	Galactose-bd-like_sf (IPR008979) - T[1-104] 3.4E-31
ProSiteProfiles	FA58C (IPR000421) - T[1-101] 22.401
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[3-98] 1.42E-27
Pfam	FA58C (IPR000421) - T[4-98] 9.2E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MFGM_HUMAN	41.414 %	72.8	1.86E-16
CPXM2_HUMAN	41.414 %	80.1	7.22E-19
FA8_HUMAN	37.895 %	72.8	2.44E-16