- Transcript 'KH2012:KH.L106.19.v1...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g40986.01.t
Possible name(s)
AGO1; AGO2; AGO3
Gene model
Location
chrUn [269,212,146 / 269,222,273]
Amino acid sequence
Length: 910
>Boschl.CG.Botznik2013.chrUn.g40986.01.p
MHIITHGMLVCIWTDRVYVYPGDPRFPVTAHSKDFNAPTRPCVGQIGKPIWLKANYFRVS
IPNGDIHHYDIDIHPDKCPRRVNREIIDTMVENYRTAIFQDRNPVFDGRKNLYTAQPLPI
DNQKLEVDVTLPGEGRDRTFRVAIKWCARVSLYSLKLALEGRMHGIPFETVTALDVVMRH
LPSMKYTPVGRSFFSSPEQSXPSLGHGREVWFGFHQSMRPXQWKMMLNIDVSATAFYKAQ
SCVDFLCEVLEVSRDELHLIRSLTDSQRVKFTKEIKGLKVEITHCGTAKRKYRVCNVTRR
PASHQTFPLQLETGXSHRMHCCSLLPRQTSAYTALSQVFPALPCLQVGQEQKHTYLPIEV
CNIVAGQRCIKKLTDVQTSTMIKATARSAPDREAEIANLVKKAQFNKDPYVKEFGIQVID
EMTEVRGRVLPPPKIQYGGDVRFESRMQATPNQGVWDMRGKQFHAGISIEVWAIACFAHQ
RMCSDQHLRQFIKQLQRISEDAGMPIKGTPVFCKYAQGSDQVEPLFRHLCHEYKALQLIV
VVLPGKTPVYAEVKRVGDTLLGIATQCVQMKNVTRTSPQTLSNLCLKINVKLGGVNNILV
PSIRPAVFNEPVIFFGADVTHPPAGDMRKPSIAAVVGSMDAHPSRYCATVRVQQHRQEII
HDLSTMVRDLMIEFYRATHFKPVRVILYRDGVSEGQFQQVLSYELRAIREACTKLEVGYQ
PGITFIVVQKRHHTRLFCRNKEDKIGKSGNIPAGTTVDLGICHPTEFDFYLCSHAGIQGT
SRPSHYHVLWDDNAFTADDLQILTYQPXPHLREVHQIGLHSGACLLRAXGCVXSQIPSRR
QGLRQRGGFVPSRIPGTVSRRRVPAAGDGQGRDRASEYWAQHVFRIRCRSSHRDRWRLPT
ALTTFFLSRR
Nucleotide sequence
Length: 2,733
>Boschl.CG.Botznik2013.chrUn.g40986.01.t
TATGCACATCATAACTCATGGTATGCTCGTATGCATATGGACAGATCGTGTGTATGTCTA
TGCTGGAGATCCCAGATTTCCGGTAACTGCTCATTCCAAGGATTTCAACGCCCCAACAAG
ACCCTGCGTCGGTCAGATTGGCAAACCGATATGGCTGAAAGCGAATTACTTCAGAGTTTC
GATACCCAATGGTGACATCCATCATTATGACATAGACATCCATCCAGACAAATGTCCGCG
AAGAGTGAATAGAGAGATTATCGACACCATGGTGGAAAATTATCGCACGGCCATATTTCA
AGATCGTAACCCTGTTTTTGATGGGAGAAAAAACCTGTACACTGCACAACCTCTTCCCAT
CGACAACCAGAAGCTCGAAGTCGATGTTACATTGCCTGGAGAAGGCCGGGACCGAACATT
CCGTGTCGCCATCAAATGGTGTGCGCGTGTGTCTCTGTACTCGCTGAAACTTGCTCTCGA
AGGCAGGATGCACGGAATACCGTTTGAGACAGTCACCGCTCTGGATGTTGTAATGCGTCA
CTTGCCATCTATGAGATACACGCCGGTGGGGAGGTCTTTCTTCTCGTCGCCAGAACAATC
GACNCCGTCCTTGGGGCACGGTCGCGAGGTATGGTTTGGCTTCCATCAGTCGATGCGTCC
CTCNCAATGGAAGATGATGTTGAATATTGATGTTTCGGCTACGGCGTTCTACAAAGCTCA
GTCTTGCGTCGATTTCTTGTGTGAGGTACTGGAAGTGAGTCGTGATGAGCTGCATCTGAT
CAGAAGTCTCACTGACTCGCAACGTGTGAAGTTCACTAAAGAGATCAAGGGATTGAAGGT
TGAAATCACCCACTGTGGAACAGCGAAGCGCAAGTACCGCGTTTGCAACGTGACTCGCAG
ACCAGCGTCGCACCAGACTTTCCCGCTTCAGCTAGAAACCGGANAAAGCCATAGAATGCA
CTGTTGCTCGTTACTTCCAAGACAAACATCAGCGTACACTGCGCTTTCTCAGGGATTTCC
TGCCTTGCCGTGCCTTCAAGTCGGCCAAGAACAAAAGCACACCTATTTGCCTATCGAAGT
ATGCAACATCGTGGCCGGACAGAGATGCATCAAGAAGCTGACCGACGTGCAGACGTCCAC
CATGATCAAAGCCACTGCCAGGTCGGCTCCGGACCGCGAGGCCGAGATTGCCAACCTCGT
CAAGAAAGCGCAGTTCAACAAAGATCCGTATGTCAAGGAGTTTGGCATCCAGGTTATTGA
CGAAATGACCGAAGTGCGTGGGCGCGTCCTCCCCCCACCCAAAATTCAGTACGGCGGTGA
TGTGAGGTTTGAGAGCCGCATGCAGGCGACGCCCAATCAGGGCGTGTGGGACATGAGGGG
GAAGCAGTTTCATGCCGGGATCAGTATCGAGGTCTGGGCAATTGCGTGCTTTGCCCACCA
GAGGATGTGCTCGGATCAACACTTGCGTCAGTTCATCAAACAGCTGCAGCGCATATCGGA
GGACGCGGGCATGCCCATCAAAGGCACGCCGGTGTTCTGCAAGTACGCGCAGGGCTCGGA
CCAGGTGGAGCCGCTGTTCCGGCACTTGTGCCACGAGTACAAGGCGCTACAGCTGATTGT
GGTCGTGCTGCCCGGAAAGACTCCTGTATACGCCGAAGTAAAGCGTGTCGGAGACACCCT
GCTGGGTATTGCCACGCAGTGCGTGCAAATGAAGAACGTGACCAGGACCTCTCCGCAGAC
CCTCTCCAACCTCTGCCTCAAGATCAACGTCAAACTCGGTGGCGTCAACAACATCCTCGT
GCCGAGCATAAGGCCAGCTGTTTTCAACGAACCTGTGATATTCTTTGGTGCCGACGTCAC
ACACCCGCCAGCCGGTGATATGAGGAAGCCGTCTATTGCTGCGGTGGTCGGAAGCATGGA
CGCCCACCCTTCGCGGTACTGCGCCACTGTCCGCGTCCAGCAGCACAGGCAGGAGATCAT
CCACGACCTGAGCACGATGGTGCGCGACCTGATGATTGAGTTCTACCGCGCCACACATTT
CAAGCCCGTCCGCGTGATACTGTACCGAGACGGCGTGTCCGAGGGACAGTTCCAGCAGGT
GCTGTCTTACGAGCTGCGGGCCATACGTGAAGCGTGTACAAAGCTGGAGGTCGGATATCA
GCCCGGCATCACTTTCATAGTGGTGCAGAAAAGACATCACACCCGCTTGTTCTGTCGCAA
CAAGGAGGACAAGATTGGAAAAAGCGGAAACATACCTGCCGGTACCACCGTGGATCTCGG
CATTTGCCACCCGACCGAATTCGACTTCTACCTCTGCAGCCACGCCGGTATTCAGGGTAC
TTCCCGCCCATCTCACTATCATGTGTTGTGGGATGACAACGCCTTCACCGCGGATGACTT
GCAGATTCTGACCTATCAGCCTGTNCCACACTTACGTGAGGTGCACCAGATCGGTCTCCA
TTCCGGCGCCTGCTTATTACGCGCATNTGGTTGCGTTCNGAGCCAGATACCATCTCGTCG
ACAAGGATTACGACAGCGGGGAGGGTTCGTCCCATCAAGGATACCCGGGACCGTCTCACG
ACGCCGCGTCCCAGCTGCAGGCGATGGCCAAGGCCGTGATCGTGCATCCGAATACTGGGC
GCAACATGTATTTCGCATAAGATGCAGAAGCTCCCATCGTGACCGTTGGCGCCTGCCGAC
TGCGCTAACAACATTTTTCTTGAGTCGCCGTTA
| Pfam |
Argonaute_N (IPR032474) - T[48-178] 9.9E-30 |
| SUPERFAMILY |
PAZ_dom_sf (IPR036085) - T[50-406] 7.06E-52 |
| SMART |
ArgoL1 (IPR014811) - T[187-239] 3.2E-25 |
| Pfam |
ArgoL1 (IPR014811) - T[188-238] 1.9E-22 |
| ProSiteProfiles |
PAZ_dom (IPR003100) - T[247-365] 17.067 |
| Pfam |
PAZ_dom (IPR003100) - T[260-382] 2.7E-15 |
| Pfam |
ArgoL2 (IPR032472) - T[391-437] 6.6E-16 |
| Pfam |
Argonaute_Mid_dom (IPR032473) - T[450-530] 8.3E-32 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[535-806] 1.24E-74 |
| ProSiteProfiles |
Piwi (IPR003165) - T[538-806] 40.835 |
| Pfam |
Piwi (IPR003165) - T[538-806] 4.2E-93 |
| SMART |
Piwi (IPR003165) - T[538-826] 7.3E-95 |
| Gene3D |
RNaseH_sf (IPR036397) - T[603-808] 2.5E-100 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AGO2_HUMAN | 71.762 % | 1153 | 0 |
| AGO1_HUMAN | 70.207 % | 1130 | 0 |
| AGO3_HUMAN | 68.935 % | 1105 | 0 |