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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g41127.01.t

Possible name(s)

F8; MFGE8; RS1

Gene model

Boschl.CG.Botznik2013.chrUn.g41127

Location

chrUn [270,013,269 / 270,015,111]

Sequences

Amino acid sequence

Length: 201

>Boschl.CG.Botznik2013.chrUn.g41127.01.p
MNRLLVLALVASVANAASEVQVAIEKLAEKVAETAAIKVIEKFDLCYLGVKSGLIDNDAI
KASSYYSNVYHPHYGRLDNEKSQGDEGCWAAKINRVGQWIQVDLGTVKKVAGVVTQGSPT
RYSQWVTRYKVACGNNLDHLQYVHEHGGTKVFDGNSDRNTKVYNYFPKVQYCRWIRIYPL
SWHLHIAMRFDLIHSQCLGLK

Nucleotide sequence

Length: 606

>Boschl.CG.Botznik2013.chrUn.g41127.01.t
TGAACCGCCTGCTTGTGCTTGCTTTGGTCGCATCTGTCGCGAATGCGGCCTCGGAAGTTC
AAGTAGCGATTGAAAAATTGGCAGAGAAAGTCGCTGAAACAGGCGCAATAAAAGTGATTG
AAAAATTCGATTGGTGTTACCTGGGAGTGAAGTCTGGACTAATTGATAATGATGCTATCA
AGGCCTCTTCCTATTATTCTAATGTATACCATCCTCACTACGGACGCCTTGACAATGAAA
AGTCGCAAGGAGACGAAGGGTGCTGGGCAGCAAAAATAAGCAGAGTTGGCCAGTGGATTC
AGGTTGACCTGGGCACTGTGAAAAAGGTTGCTGGAGTAGTCACGCAGGGCAGCCCGACCC
GCTACTCTCAATGGGTGACCAGATATAAAGTAGCATGCGGCAACAATTTGGACCATCTAC
AATATGTTCATGAACACGGAGGAACCAAGGTATTTGATGGGAACAGCGACAGGAACACAA
AAGTTTACAATTACTTTCCGAAGGTCCAGTACTGCAGATGGATCAGAATTTATCCACTGT
CATGGCACCTTCACATAGCCATGAGATTCGACTTGATTCACAGCCAATGCTTGGGATTGA
AATAAC

InterProScan

ProSiteProfiles
FA58C (IPR000421) - T[43-195] 27.044
SMART
FA58C (IPR000421) - T[45-195] 6.8E-9
Gene3D
Galactose-bd-like_sf (IPR008979) - T[46-197] 2.3E-45
SUPERFAMILY
Galactose-bd-like_sf (IPR008979) - T[48-193] 1.84E-40
Pfam
FA58C (IPR000421) - T[60-190] 1.4E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MFGM_HUMAN 36.774 % 90.5 1.68E-21
XLRS1_HUMAN 34.375 % 87 3.59E-21
FA8_HUMAN 32.667 % 84.7 3.83E-19





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